DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and Bap55

DIOPT Version :10

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster


Alignment Length:421 Identity:115/421 - (27%)
Similarity:200/421 - (47%) Gaps:71/421 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGPKAEEH----------- 65
            :|.|.|...::.|:|.|..||...|:.:|       :..|.|.::....|.:.:           
  Fly    16 LVFDPGHHSLRVGYAQEDSPKAEIPSVVG-------IGAAPETNLDPETKTDNNATPNNADQRKF 73

  Fly    66 ----------RGLLSIRYPMEHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRN 120
                      |..:.::..|:.|::.:|:..|::..|.|: ..:.:..|.||||.:||..|.|.|
  Fly    74 YVDTNYVTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYA-NVIQSEPEYHPVLFSEASWNVRNN 137

  Fly   121 REKAAEFFFEGINAPALFVSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDI 185
            |||..|..||..|.||.|:...|||:.:::||.|.:|:|||...|.|||::||:.:..::::..:
  Fly   138 REKLTELMFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLSQAVVKSPL 202

  Fly   186 AGRDVTRYLKTLIRREGFNF--------------RSTAEFEI-------------------VRSI 217
            .|..::|..:..:.:.|.:.              |....|.:                   ::..
  Fly   203 GGDFLSRQCRQHLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQNYMLQLMMQDF 267

  Fly   218 KEKVCYLATNPQKEE-TVETEKFAYKLPDGKIFEIGPARFRAPEVLFRPDLLGEECEGIHDVLMY 281
            :..|..:..||..|. ..:.....|:.|:|...:.|..||:..|.||...:|     |...:...
  Fly   268 QMNVLQVLENPFDERVAAQIPTVHYEFPNGYHQDFGSERFKIAESLFDNAML-----GAGQLAST 327

  Fly   282 SIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKKHSAKDLKIRIAAPQ---ERLYSTWMG 343
            |:...|.|:|..|:.::|::||:||.:||.:||..:|:..:..:.::::.:..   ||.:..|:|
  Fly   328 SVGMCDADVRLSLFGSVVVTGGNTLLQGFPERLNRDLQLRAPSNTRLKMISANGSVERRFGAWIG 392

  Fly   344 GSILASLDTFKKMWISKREYEEEGQKAVHRK 374
            ||||||:.||::||||.:||||.|:..|.||
  Fly   393 GSILASIGTFQQMWISSQEYEEAGKSQVERK 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 ASKHA_NBD_Arp1 9..375 CDD:466820 115/421 (27%)
Bap55NP_611209.1 ASKHA_NBD_Arp4_ACTL6-like 10..416 CDD:466846 111/412 (27%)

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