DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and Actr8

DIOPT Version :9

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001296388.1 Gene:Actr8 / 361107 RGDID:1311878 Length:624 Species:Rattus norvegicus


Alignment Length:523 Identity:97/523 - (18%)
Similarity:189/523 - (36%) Gaps:205/523 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QPVVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGP------KAEEHRGL 68
            :|.::|:.||             .::.|...:|::   :.|  |..::|.|      .....||.
  Rat   144 RPAILDHCSG-------------NKWTNTSHQPEY---LVG--EEALYVNPLDCYNIHWPIRRGQ 190

  Fly    69 LSIRYPMEHGIVTD-WNDMERIWSY------------------------IYSKEQLATFTEDHPV 108
            |:| :|...|.:|. ..|:|.|||:                        ||:|:.:....  |.:
  Rat   191 LNI-HPGPGGSLTAVLADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELV--HMI 252

  Fly   109 LLTEAPLNPRRNREKAAEFFFEGINAPALFVSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEG 173
            |:               :..|.||     .|..::|.:.:.:|..:..|:|.||..|....:.:|
  Rat   253 LM---------------KMGFAGI-----VVHQESVCATFGSGLSSTCVVDVGDQKTSVCCVEDG 297

  Fly   174 FAMPHSIMRVDIAGRDVTRYLKTLIRREGFNFR-----STAEFEIVRSIKEKVCYLATNPQKEET 233
            .:..::.:.:...|.||:|....|::|.||.:|     :..:..:::.:||..|:|   .|....
  Rat   298 VSHRNTRLCLAYGGSDVSRCFYWLMQRAGFPYRECQLANKMDCLLLQHLKETFCHL---DQDISG 359

  Fly   234 VETEKFAYKLPDGKI----FEIGPARFRAPEVLFRP----------------------------- 265
            ::..:|..:.||...    |.:|..:.:||..||.|                             
  Rat   360 LQDHEFQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGIVGQKMTTLQHRSQGDPEDPHDEHY 424

  Fly   266 -----------------------------DLLGEECE---------------------------- 273
                                         ||.|:..:                            
  Rat   425 LLATQSKQEQSAKATADRKSASKPIGFEGDLRGQSSDLPERLHSQEVDLASSQGDCLMAGNESEE 489

  Fly   274 --------------------GIHDVLMYSIE--KSDMDLRKMLYQNIVLSGGSTLF----KGFGD 312
                                |:...:::|::  .|| |.:|.:|.:|::.||..:|    :....
  Rat   490 ALTALMSRKTAISLFEGKALGLDKAILHSVDCCSSD-DTKKKMYSSILVVGGGLMFHKAQEFLQH 553

  Fly   313 RLLSELK---KHSAKDLKIRIAAPQE---RLYSTWMGGSILASLDTFKKMWISKREYEEEGQKAV 371
            |:|:::.   :...:::.: |..|::   ||.| |.||::||.|||.:::||.:||::..|.:.:
  Rat   554 RILNKMPPSFRRIIENVDV-ITRPKDMDPRLIS-WKGGAVLACLDTTQELWIYQREWQRFGVRML 616

  Fly   372 HRK 374
            ..:
  Rat   617 RER 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:302596 97/523 (19%)
ACTIN 9..376 CDD:214592 97/523 (19%)
Actr8NP_001296388.1 NBD_sugar-kinase_HSP70_actin 162..619 CDD:418402 92/490 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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