DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp1 and ACTBL2

DIOPT Version :9

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001017992.1 Gene:ACTBL2 / 345651 HGNCID:17780 Length:376 Species:Homo sapiens


Alignment Length:369 Identity:197/369 - (53%)
Similarity:271/369 - (73%) Gaps:5/369 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGPKAEEHRGLLSIRYPME 76
            :|:|||||:.||||.|:..|:..||:.||||:|..||.|..:.|.:||.:|:..||:|:::||:|
Human     9 LVVDNGSGMCKAGFGGDDAPRAVFPSMIGRPRHQGVMVGMGQKDCYVGDEAQSKRGVLTLKYPIE 73

  Fly    77 HGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGINAPALFVSM 141
            ||:||:|:|||:||.:.:..| |....::||:|||||||||:.||||..:..||..|.||::|::
Human    74 HGVVTNWDDMEKIWYHTFYNE-LRVAPDEHPILLTEAPLNPKINREKMTQIMFEAFNTPAMYVAI 137

  Fly   142 QAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLKTLIRREGFNFR 206
            ||||||||:||.||:|:||||||||.||||||:|:||:|:|:|:||||:|.||..::...|:||.
Human   138 QAVLSLYASGRTTGIVMDSGDGVTHIVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYNFT 202

  Fly   207 STAEFEIVRSIKEKVCYLATNPQKE----ETVETEKFAYKLPDGKIFEIGPARFRAPEVLFRPDL 267
            :|||.||||.:|||:||:|.:.::|    ....:.:.:|:||||::..||..|||.||.:|:|..
Human   203 TTAEREIVRDVKEKLCYVALDFEQEMVRAAASSSPERSYELPDGQVITIGNERFRCPEAIFQPSF 267

  Fly   268 LGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKKHSAKDLKIRIAA 332
            ||.|..|||:....||.|.|:|:||.||.|.|||||||::.|..||:..|:...:...:||:|.|
Human   268 LGIESSGIHETTFNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEIITLAPSTMKIKIIA 332

  Fly   333 PQERLYSTWMGGSILASLDTFKKMWISKREYEEEGQKAVHRKTF 376
            |.||.||.|:||||||||.||::|||||:||:|.|...||||.|
Human   333 PPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPPIVHRKCF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:302596 196/367 (53%)
ACTIN 9..376 CDD:214592 196/367 (53%)
ACTBL2NP_001017992.1 NBD_sugar-kinase_HSP70_actin 1..376 CDD:327376 196/367 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

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