DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and Arp8

DIOPT Version :9

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_573251.1 Gene:Arp8 / 32769 FlyBaseID:FBgn0030877 Length:607 Species:Drosophila melanogaster


Alignment Length:435 Identity:73/435 - (16%)
Similarity:147/435 - (33%) Gaps:138/435 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 IRYPMEHGIVTDWND-----------MERIWSYIYSK------EQLATFTEDHPVLLTEAPLNPR 118
            |.:|::.|.:...|:           :||||||...:      .:|.|    |..:|....:..|
  Fly   177 IHFPIQRGELNVHNEKGGSLQASMQHLERIWSYALEERLKIPLRKLGT----HCAVLVVNDVYVR 237

  Fly   119 RNREKAAEFFFEGINAPALFVSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRV 183
            |:..:........:.....|:...:|.|.:..|...|.|:|.|...|....|.:|.:...:.:|:
  Fly   238 RHLREFVTLLLRRLGFRRCFLVQDSVASTFGAGIGYGCVVDIGAQKTSIACIEDGISQLDARVRL 302

  Fly   184 DIAGRDVTRYLKTLIRREGFNFR------STAEFEIVRSIKEKVCYLATNPQKEETVETEKFAYK 242
            ...|.|:.:.|..|:|:.||.:|      |..:..::..:|||.|:|..:..   ..:.:.|..:
  Fly   303 SYGGGDLDQVLLLLLRKCGFPYRECNVQESYVDAHLLDELKEKFCHLNASVC---GAQEKHFNLR 364

  Fly   243 LPDGK----IFEIGPARFRAPEVLFRPDLLG--------------------EEC----------- 272
            ..:|:    ..::|.....||..||..:||.                    |:|           
  Fly   365 KHNGQWLRYTIQVGDEALMAPLALFHTELLNITGRTKAVFTQQAVQDQYDCEDCFDAEYLKETGR 429

  Fly   273 -EGIH--DVLMYSIEK------------------------------------------------- 285
             .|:.  |:|..|...                                                 
  Fly   430 KNGVRGGDILQLSTSAGYQPRPQLPVTADDEELIVVDQDETISNCQSQLGAQTAGGQMNSNGCYH 494

  Fly   286 --------------------SDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKKHSAKDLKIRI 330
                                |..:.::.::.:|:|.|.|....|....|...:.:....::.:.|
  Fly   495 NGQGLVLPLDQAIIQSINRLSSYETKRKMFGSILLVGSSAKLPGLAAWLEQRISQQVQSEVNVLI 559

  Fly   331 AAPQERLYSTWMGGSILASLDTFKKMWISKREYEEEGQKAVHRKT 375
            ......:.: |.|.:|::.|::.:::|||:.:::..|.:.:..::
  Fly   560 KGMDAGMVA-WKGAAIMSVLESARELWISQNDWQRHGLRVLRERS 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:302596 73/435 (17%)
ACTIN 9..376 CDD:214592 73/435 (17%)
Arp8NP_573251.1 NBD_sugar-kinase_HSP70_actin 202..603 CDD:302596 69/408 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467794
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11937
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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