DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and actr8

DIOPT Version :9

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001001400.1 Gene:actr8 / 326866 ZFINID:ZDB-GENE-030131-5065 Length:623 Species:Danio rerio


Alignment Length:518 Identity:100/518 - (19%)
Similarity:170/518 - (32%) Gaps:196/518 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QPVVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGPK--AEEH----RGL 68
            :|.|:|..|             |..:.|....|::|   .|  |..::|.|.  ...|    ||.
Zfish   144 RPAVLDPNS-------------KVSWTNTSHHPEYV---VG--EEALYVNPTDCYSVHWPVCRGR 190

  Fly    69 LSIRYPMEHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRR------------NR 121
            |::.......:.....|:|.||::...|             |.:.||...:            ||
Zfish   191 LNLHSGSGGSLSAVMMDLEHIWTHALQK-------------LLQIPLKDLKYYRCILLIPDIYNR 242

  Fly   122 EKAAE---FFFEGINAPALFVSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRV 183
            :...|   .....:...|:.|..::|.:.:.:|..:..|:|.||..|....:.:|.:...|.:.:
Zfish   243 QHVKEIVNMLLVKMGFSAVVVHQESVCATFGSGLSSACVVDVGDQKTSVCCVEDGVSHRSSRLCL 307

  Fly   184 DIAGRDVTRYLKTLIRREGFNFR-----STAEFEIVRSIKEKVCYLATNPQKEETVETEKFAYKL 243
            ...|.||||....|::|.||.:|     :..:..:::.:||..|:|   .|....::..:|..:.
Zfish   308 AYGGSDVTRCFFWLMQRAGFPYRDCQLGNKLDCVLLQQLKESFCHL---DQDISGLQDHEFRTRF 369

  Fly   244 PDGKI----FEIGPARFRAPEVLFRPDLLG----------------------------------- 269
            ||..:    ..:|..:.:||..||.|...|                                   
Zfish   370 PDSPVLLYQLRLGDEKLQAPMTLFYPAAFGIVGQRMTSLLHRSQGDAEDPHDEHFLLTTQSKQDQ 434

  Fly   270 ---------------------EECE---------------------------------------- 273
                                 ..||                                        
Zfish   435 SSKASADRKSFPKPSSFEGESSVCEVSDRSSLGQDLDLGHSQAECLVGGAETEETPSALLSRKTA 499

  Fly   274 ---------GIHDVLMYSIEK--SDMDLRKMLYQNIVLSGGSTLFKGFGD----RLLSELKKH-- 321
                     ||...:::||:.  ||...||| |..|::.||..||.|..:    |:|:::...  
Zfish   500 MSQFEGKALGIDKAILHSIDSCASDETKRKM-YSCILVVGGGLLFHGAQEFLQHRILNKMPPSFR 563

  Fly   322 ----------SAKDLKIRIAAPQERLYSTWMGGSILASLDTFKKMWISKREYEEEGQKAVHRK 374
                      ..||...|:.        .|.|||:||.|||.:::||.:||::..|.:.:..:
Zfish   564 CMVESVDVITRPKDTDARVC--------VWKGGSVLACLDTTQELWIHQREWQRFGVRMLRER 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:302596 100/518 (19%)
ACTIN 9..376 CDD:214592 100/518 (19%)
actr8NP_001001400.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
NBD_sugar-kinase_HSP70_actin 207..617 CDD:302596 84/434 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 428..458 0/29 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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