DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and Actr1b

DIOPT Version :9

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001034117.2 Gene:Actr1b / 316333 RGDID:1307380 Length:376 Species:Rattus norvegicus


Alignment Length:376 Identity:291/376 - (77%)
Similarity:342/376 - (90%) Gaps:0/376 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEPYDVVVNQPVVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGPKAEEH 65
            ||.||::.|||||||||||||||||||:.|||..||||:|||||:||||||||||:|:|||||||
  Rat     1 MESYDIIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGPKAEEH 65

  Fly    66 RGLLSIRYPMEHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFE 130
            ||||:||||||||:|.|||||||||.|:|||:||.||:|:||||||||||||.:|||||||.|||
  Rat    66 RGLLTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVFFE 130

  Fly   131 GINAPALFVSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLK 195
            ..|.||||:|||||||||||||.|||||||||||||||||||||||||||||||||||||:|||:
  Rat   131 TFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVSRYLR 195

  Fly   196 TLIRREGFNFRSTAEFEIVRSIKEKVCYLATNPQKEETVETEKFAYKLPDGKIFEIGPARFRAPE 260
            .|:|:||.:|.::||||:||:|||:.|||:.||||:|.:||||..|.||||...::|||||||||
  Rat   196 LLLRKEGADFHTSAEFEVVRTIKERACYLSINPQKDEALETEKVQYTLPDGSTLDVGPARFRAPE 260

  Fly   261 VLFRPDLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKKHSAKD 325
            :||:|||:|:|.||:|:||.::|.|||||||:.|:.|||||||||||||||||||||:||.:.||
  Rat   261 LLFQPDLVGDESEGLHEVLAFAIHKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKD 325

  Fly   326 LKIRIAAPQERLYSTWMGGSILASLDTFKKMWISKREYEEEGQKAVHRKTF 376
            :||:|:||||||||||:|||||||||||||||:||:||||:|.:|:|||||
  Rat   326 VKIKISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGSRAIHRKTF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:302596 286/370 (77%)
ACTIN 9..376 CDD:214592 285/366 (78%)
Actr1bNP_001034117.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:418402 286/370 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 619 1.000 Domainoid score I174
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 635 1.000 Inparanoid score I801
OMA 1 1.010 - - QHG55293
OrthoDB 1 1.010 - - D306902at33208
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 1 1.000 - - otm45989
orthoMCL 1 0.900 - - OOG6_103845
Panther 1 1.100 - - O PTHR11937
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3841
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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