DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and Actl7a

DIOPT Version :10

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001011973.1 Gene:Actl7a / 298017 RGDID:1304697 Length:440 Species:Rattus norvegicus


Alignment Length:376 Identity:140/376 - (37%)
Similarity:212/376 - (56%) Gaps:15/376 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VNQPVVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGPKAEEHRGLLSIR 72
            |.:.||:|.|:|..|.||||...|..:....:|:|.......|....:.|||.:.......|.:.
  Rat    73 VTKAVVVDLGTGFCKCGFAGLPKPTHKISTTVGKPYMETAKTGDNRKETFVGRELFNPDIHLKLV 137

  Fly    73 YPMEHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGINAPAL 137
            .|:.|||:.||:.::.||.|:: ::::....|:|.||:::.||:|..||||.||..||..|.||:
  Rat   138 NPLRHGIIVDWDTVQDIWEYLF-RQEMKIAPEEHAVLVSDPPLSPHTNREKYAEMLFETFNTPAM 201

  Fly   138 FVSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLKTLIRREG 202
            .::.|:.||:|:.||.:|:|::.|.||::.||||||:.:|....|:|.||.|:|.||..|:...|
  Rat   202 HIAYQSRLSMYSYGRTSGLVVEVGHGVSYVVPIYEGYPLPSITGRLDYAGSDLTNYLMNLMNNCG 266

  Fly   203 FNFRSTAEFEIVRSIKEKVCYLATNPQKEETV--ETEKFAYKLPDGKIFEIGPARFRAPEVLFRP 265
            .:| |.....||..||.|.|::|.:|.:|:.:  ...:..|.|||||...:|..||...|:.|:|
  Rat   267 KHF-SEDHLSIVEDIKTKCCFVALDPIEEKKIPPSEHEIHYTLPDGKEIRLGQERFLCSEMFFKP 330

  Fly   266 DLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKKHSAKDLKIRI 330
            .|:.....|:|...:..:.|.|:.|::.|..||:|.||||:.:||.:||..||......|     
  Rat   331 SLIKSMQLGLHTQTVSCLNKCDIALKRDLMGNILLCGGSTMLRGFPNRLQKELSSMCPND----- 390

  Fly   331 AAPQ-----ERLYSTWMGGSILASLDTFKKMWISKREYEEEGQKAVHRKTF 376
             .||     ||..:.|.||||||||..|:.:|:.:.||||.|...::|:.|
  Rat   391 -TPQVNVLPERDTAVWTGGSILASLQGFQPLWVHRLEYEEHGPFFLYRRCF 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 ASKHA_NBD_Arp1 9..375 CDD:466820 138/372 (37%)
Actl7aNP_001011973.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
ACTL7A_N 6..70 CDD:465280
Required for interaction with TES. /evidence=ECO:0000250|UniProtKB:Q9Y615 36..56
ASKHA_NBD_ACTL7 72..439 CDD:466819 139/373 (37%)
Blue background indicates that the domain is not in the aligned region.

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