DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and Actr1b

DIOPT Version :9

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_666219.1 Gene:Actr1b / 226977 MGIID:1917446 Length:376 Species:Mus musculus


Alignment Length:376 Identity:291/376 - (77%)
Similarity:342/376 - (90%) Gaps:0/376 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEPYDVVVNQPVVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGPKAEEH 65
            ||.||::.|||||||||||||||||||:.|||..||||:|||||:||||||||||:|:|||||||
Mouse     1 MESYDIIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGPKAEEH 65

  Fly    66 RGLLSIRYPMEHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFE 130
            ||||:||||||||:|.|||||||||.|:|||:||.||:|:||||||||||||.:|||||||.|||
Mouse    66 RGLLTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVFFE 130

  Fly   131 GINAPALFVSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLK 195
            ..|.||||:|||||||||||||.|||||||||||||||||||||||||||||||||||||:|||:
Mouse   131 TFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVSRYLR 195

  Fly   196 TLIRREGFNFRSTAEFEIVRSIKEKVCYLATNPQKEETVETEKFAYKLPDGKIFEIGPARFRAPE 260
            .|:|:||.:|.::||||:||:|||:.|||:.||||:|.:||||..|.||||...::|||||||||
Mouse   196 LLLRKEGADFHTSAEFEVVRTIKERACYLSINPQKDEALETEKVQYTLPDGSTLDVGPARFRAPE 260

  Fly   261 VLFRPDLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKKHSAKD 325
            :||:|||:|:|.||:|:||.::|.|||||||:.|:.|||||||||||||||||||||:||.:.||
Mouse   261 LLFQPDLVGDESEGLHEVLAFAIHKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKD 325

  Fly   326 LKIRIAAPQERLYSTWMGGSILASLDTFKKMWISKREYEEEGQKAVHRKTF 376
            :||:|:||||||||||:|||||||||||||||:||:||||:|.:|:|||||
Mouse   326 VKIKISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGSRAIHRKTF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:302596 286/370 (77%)
ACTIN 9..376 CDD:214592 285/366 (78%)
Actr1bNP_666219.1 NBD_sugar-kinase_HSP70_actin 5..376 CDD:418402 286/370 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 619 1.000 Domainoid score I182
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 634 1.000 Inparanoid score I837
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55293
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 1 1.000 - - otm43901
orthoMCL 1 0.900 - - OOG6_103845
Panther 1 1.100 - - O PTHR11937
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4323
SonicParanoid 1 1.000 - - X3841
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.870

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