DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and actl6a

DIOPT Version :9

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_005165974.1 Gene:actl6a / 192313 ZFINID:ZDB-GENE-020419-36 Length:455 Species:Danio rerio


Alignment Length:447 Identity:136/447 - (30%)
Similarity:213/447 - (47%) Gaps:91/447 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGPKAEEH----------- 65
            :|.|.||..::||:|||..||..||..||........:..:|.|   |.|.::.           
Zfish    14 LVFDMGSYSVRAGYAGEDCPKADFPTVIGVTLDREDGSTPMETD---GEKGKQSGTTYFIDTNQL 75

  Fly    66 ---RGLLSIRYPMEHGIVTDWNDMERIWSYIYS---KEQLATFTEDHPVLLTEAPLNPRRNREKA 124
               |..:.:..|:::|::.||:..:.|..:.|.   |.|...    ||||::||..|.|..|||.
Zfish    76 RVPRESMEVMSPLKNGMIEDWDSFQAILDHTYKMHFKSQPGL----HPVLMSEASWNTRAKREKL 136

  Fly   125 AEFFFEGINAPALFVSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRD 189
            .|..||..|.||.|:...||||.:|.||.||:|||||...|.|:|:::|:.:...|::..:||..
Zfish   137 TELMFEHYNIPAFFLCKSAVLSAFANGRSTGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAGDF 201

  Fly   190 VTRYLKTLIRR------------------EGFNFRSTAEFE------------------------ 212
            ::...:.|.:.                  ||::.:....||                        
Zfish   202 MSMQCRELFQELGVEIVPPYMIASKVRPFEGYDSQLIKMFESNNFIMFSLKDSVREGTPASWKKK 266

  Fly   213 -----------------IVRSIKEKVCYLATNPQKEE-TVETEKFAYKLPDGKIFEIGPARFRAP 259
                             :::..:..|..::.:|..|: ..:.....|:||:|...:.|..|.:.|
Zfish   267 EKLPQVTRSWHNYMCNTVIQDFQASVLQVSDSPYDEQVAAQMPTVHYELPNGYNCDFGAERLKIP 331

  Fly   260 EVLFRPD----LLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKK 320
            |.||.|.    |.|....|:..|:..|:...|:|:|..||.::|::||:||.:||.|||..||.:
Zfish   332 EGLFDPSNAKGLSGNTMLGVGHVVTTSVGMCDIDIRPGLYGSVVVTGGNTLIQGFTDRLNRELSQ 396

  Fly   321 HSAKDLKIRIAAPQ---ERLYSTWMGGSILASLDTFKKMWISKREYEEEGQKAVHRK 374
            .:...:::::.|..   ||.:|.|:||||||||.||::|||||:||||.|::.|.||
Zfish   397 KTPPSMRLKLIANNTTVERRFSAWIGGSILASLGTFQQMWISKQEYEEGGKQCVDRK 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:302596 136/447 (30%)
ACTIN 9..376 CDD:214592 136/447 (30%)
actl6aXP_005165974.1 NBD_sugar-kinase_HSP70_actin 10..454 CDD:302596 136/447 (30%)
Actin 11..455 CDD:278451 136/447 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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