DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and arx-2

DIOPT Version :9

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_505657.1 Gene:arx-2 / 179440 WormBaseID:WBGene00000200 Length:395 Species:Caenorhabditis elegans


Alignment Length:377 Identity:167/377 - (44%)
Similarity:243/377 - (64%) Gaps:23/377 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VVIDNGSGVIKAGFAGEHIPKCRFPNYIGRP---KHVRVMAGALE-GDIFVGPKAEEHRGLLSIR 72
            :|:|||:|.:|.|:||.:.|...||:.:|||   ...||  |.:| .|:.||.:..:.|.:|.|.
 Worm     9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRV--GNIEIKDLMVGEECSQLRQMLDIN 71

  Fly    73 YPMEHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGINAPAL 137
            |||::|||.:|:||..:|.:.:..|:|....::..:||||.||||..||||..:..||.....::
 Worm    72 YPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSI 136

  Fly   138 FVSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLKTLIRREG 202
            :|::||||:|||.|.:||||:||||||||..|:|||||:.|...|:||||||:|:||..|:.:.|
 Worm   137 YVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRG 201

  Fly   203 FNFRSTAEFEIVRSIKEKVCYLATNPQKEETVETEKFA----YKLPDGKIFEIGPARFRAPEVLF 263
            :||..:|:||.||.:|||:||:|.:.::||.:..|...    |.||||::..:|..||.|||:||
 Worm   202 YNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILF 266

  Fly   264 RPDLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKK-------H 321
            :|.|:..|..|:.::|...|:.||:|.|...|::||||||:|::.|...||..|||:       |
 Worm   267 QPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLH 331

  Fly   322 SAKD----LKIRIAAPQERLYSTWMGGSILASL--DTFKKMWISKREYEEEG 367
            ...|    .||||.||..|.:..::||::||:|  |..:..|:||:||||.|
 Worm   332 GNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:302596 167/377 (44%)
ACTIN 9..376 CDD:214592 167/377 (44%)
arx-2NP_505657.1 NBD_sugar-kinase_HSP70_actin 1..383 CDD:302596 166/375 (44%)
ACTIN 6..392 CDD:214592 167/377 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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