DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and ACTRT2

DIOPT Version :9

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_536356.3 Gene:ACTRT2 / 140625 HGNCID:24026 Length:377 Species:Homo sapiens


Alignment Length:367 Identity:160/367 - (43%)
Similarity:232/367 - (63%) Gaps:3/367 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGPKAEEHRGLLSIRYPME 76
            |:.|||||..|||.:||..|:....:.:|..|.....|.|.:...|||.:|...:..|.:..|.|
Human    12 VIFDNGSGFCKAGLSGEFGPRHMVSSIVGHLKFQAPSAEANQKKYFVGEEALYKQEALQLHSPFE 76

  Fly    77 HGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGINAPALFVSM 141
            .|::|.|:|:||:|.:::..| |.....|.|:|.||..||||.||||.||..||....||.::|.
Human    77 RGLITGWDDVERLWKHLFEWE-LGVKPSDQPLLATEPSLNPRENREKMAEVMFENFGVPAFYLSD 140

  Fly   142 QAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLKTLIRREGFNFR 206
            ||||:|||:..|||:|:||||.||..|||:||:::||::.::.:||||:|..|..|:...|..|.
Human   141 QAVLALYASACVTGLVVDSGDAVTCTVPIFEGYSLPHAVTKLHVAGRDITELLMQLLLASGHTFP 205

  Fly   207 STAEFEIVRSIKEKVCYLATNPQKEETVETEKF--AYKLPDGKIFEIGPARFRAPEVLFRPDLLG 269
            ...:..:|..||:|:||:|..|:||.:...|:.  .||||||.|..:|....:|||.||.|..||
Human   206 CQLDKGLVDDIKKKLCYVALEPEKELSRRPEEVLREYKLPDGNIISLGDPLHQAPEALFVPQQLG 270

  Fly   270 EECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKKHSAKDLKIRIAAPQ 334
            .:..|:.:::..||.|.|.|::|:|:..||||||:|||.|..||||.||::.::||..|:|.||.
Human   271 SQSPGLSNMVSSSITKCDTDIQKILFGEIVLSGGTTLFHGLDDRLLKELEQLASKDTPIKITAPP 335

  Fly   335 ERLYSTWMGGSILASLDTFKKMWISKREYEEEGQKAVHRKTF 376
            :|.:|||:|.||:.||.:||:||::..:::|.|...|.|:.|
Human   336 DRWFSTWIGASIVTSLSSFKQMWVTAADFKEFGTSVVQRRCF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:302596 159/365 (44%)
ACTIN 9..376 CDD:214592 159/365 (44%)
ACTRT2NP_536356.3 ACTIN 10..377 CDD:214592 159/365 (44%)
NBD_sugar-kinase_HSP70_actin 11..377 CDD:302596 159/365 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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