DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and ACTRT1

DIOPT Version :10

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_612146.1 Gene:ACTRT1 / 139741 HGNCID:24027 Length:376 Species:Homo sapiens


Alignment Length:367 Identity:153/367 - (41%)
Similarity:228/367 - (62%) Gaps:4/367 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGPKAEEHRGLLSIRYPME 76
            |:.|||||:.|||.:||..|:....:.:|..| ..|....|....|||.:|......|.:.||:|
Human    12 VIFDNGSGLCKAGLSGEIGPRHVISSVLGHCK-FNVPLARLNQKYFVGQEALYKYEALHLHYPIE 75

  Fly    77 HGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGINAPALFVSM 141
            .|:||.|:|||::|.:::.:| |.......|||:||..||||..|||.||..||..:.|..::|.
Human    76 RGLVTGWDDMEKLWKHLFERE-LGVKPSQQPVLMTEPSLNPREIREKLAEMMFETFSVPGFYLSN 139

  Fly   142 QAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLKTLIRREGFNFR 206
            .||.:|||:..|||:|:|||||||..|||:||:::||::.::.:||||:|.:|..|:...||||.
Human   140 HAVAALYASACVTGLVVDSGDGVTCTVPIFEGYSLPHAVTKLCMAGRDITEHLTRLLFASGFNFP 204

  Fly   207 STAEFEIVRSIKEKVCYLATNPQKEETVETEKF--AYKLPDGKIFEIGPARFRAPEVLFRPDLLG 269
            ......:|.:||||:||:|..|:||......:.  ||:||||.:...|...::.|||||.||.||
Human   205 CILNKAVVNNIKEKLCYIALEPEKELRKSRGEVLGAYRLPDGHVIHFGDELYQVPEVLFAPDQLG 269

  Fly   270 EECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKKHSAKDLKIRIAAPQ 334
            ....|:..::..||.|.|.|::..||.:||||||:||..|..:||:.|:::.::|...|:|.|..
Human   270 IHSPGLSKMVSSSIMKCDTDIQNKLYADIVLSGGTTLLPGLEERLMKEVEQLASKGTPIKITASP 334

  Fly   335 ERLYSTWMGGSILASLDTFKKMWISKREYEEEGQKAVHRKTF 376
            :|.:|.|:|.||:.|:.:||:||::..:::|.|...|.|:.|
Human   335 DRCFSAWIGASIMTSMSSFKQMWVTSADFKEYGTSVVQRRCF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 ASKHA_NBD_Arp1 9..375 CDD:466820 152/364 (42%)
ACTRT1NP_612146.1 ASKHA_NBD_actin_Arp-T1-3 10..367 CDD:466848 149/356 (42%)

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