DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and LOC1281498

DIOPT Version :10

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_321420.4 Gene:LOC1281498 / 1281498 VectorBaseID:AGAMI1_013769 Length:376 Species:Anopheles gambiae


Alignment Length:370 Identity:202/370 - (54%)
Similarity:273/370 - (73%) Gaps:7/370 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGPKAEEHRGLLSIRYPME 76
            :|:|||||:.||||||:..|:..||:.:|||:|..||.|....|.:||.:|:..||:|:::||:|
Mosquito     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQSKRGILTLKYPIE 73

  Fly    77 HGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGINAPALFVSM 141
            |||:|:|:|||:||.:.:..| |....|:||||||||||||:.||||..:..||...|||::|::
Mosquito    74 HGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKSNREKMTQIMFETFAAPAVYVAI 137

  Fly   142 QAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLKTLIRREGFNFR 206
            ||||||||:||.|||||||||||:|.||||||:|:||:|:|:|:||||:|.||..::...|::|.
Mosquito   138 QAVLSLYASGRTTGVVLDSGDGVSHTVPIYEGYALPHAILRMDLAGRDLTDYLMKILTERGYSFT 202

  Fly   207 STAEFEIVRSIKEKVCYLATNPQKE-----ETVETEKFAYKLPDGKIFEIGPARFRAPEVLFRPD 266
            :|||.||||.||||:||:|.:.::|     .:..:|| :|:||||::..||..||||||.||:|.
Mosquito   203 TTAEREIVRDIKEKLCYVALDFEQEMQAAAASSSSEK-SYELPDGQVITIGNERFRAPEALFQPS 266

  Fly   267 LLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKKHSAKDLKIRIA 331
            .||.|..|||:.:..||.:.|:|:||.||.|.|||||:|::.|..||:..|:...:...:||:|.
Mosquito   267 FLGMESTGIHETVYNSIMRCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITSLAPSTIKIKII 331

  Fly   332 APQERLYSTWMGGSILASLDTFKKMWISKREYEEEGQKAVHRKTF 376
            ||.||.||.|:||||||||.||:.|||||.||:|.|...||||.|
Mosquito   332 APPERKYSVWIGGSILASLSTFQTMWISKHEYDEGGPGIVHRKCF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 ASKHA_NBD_Arp1 9..375 CDD:466820 200/367 (54%)
LOC1281498XP_321420.4 ASKHA_NBD_actin 8..371 CDD:466823 197/363 (54%)

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