DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and Arp6

DIOPT Version :10

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_315883.4 Gene:Arp6 / 1276525 VectorBaseID:AGAMI1_013800 Length:407 Species:Anopheles gambiae


Alignment Length:411 Identity:100/411 - (24%)
Similarity:179/411 - (43%) Gaps:55/411 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NQPVVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHVRVMAGALEGDIFVGPKAEEHRGLLSIRY 73
            |...|:|||:...|.|.:.:..|| ...|.|.:.|..|...       |:|.:.||.|....:.|
Mosquito     4 NNAFVLDNGAFYAKLGLSDDPEPK-TILNCITKAKSERRRP-------FIGNQIEECRDASGLFY 60

  Fly    74 PM--EHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFFEGINAPA 136
            .:  :.|.:.:|:..:.:|.|::|.:.......|.|:|:||...|....:|...|..:|..:..|
Mosquito    61 ILCFQRGYLVNWDVQKTVWDYLFSPDCCPVQFADTPLLITEPLFNFGSIQEAMLEILYEEYDCDA 125

  Fly   137 LFVSMQAVLSLY------ATGRVTG------VVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRD 189
            :..|....|:.:      .|.:..|      ||::.|...||.||..:|..:..:|.|:|:.|:.
Mosquito   126 VCKSTAIDLAAFNYTHSEQTEQPEGKRPLACVVVEMGFSFTHVVPFVKGCKVREAIRRIDVGGKV 190

  Fly   190 VTRYLKTLIRREGFNFRSTAEFEIVRSIKEKVCYLATNPQKEETVETEKF-------AYKLPD-- 245
            :|.:||.:|.....|...  |..::..:||..|:::.|..::..:..::.       .|.|||  
Mosquito   191 LTNHLKEIISYRQLNVMD--ESYVINQVKEDSCFVSQNFNEDMRIARKRIPDNTILREYVLPDYT 253

  Fly   246 -------------------GKIFE---IGPARFRAPEVLFRPDLLGEECEGIHDVLMYSIEKSDM 288
                               |:..:   :|..||..||:||.|..:|.:..|:.:.::.:|.....
Mosquito   254 QIRRGFLRKPNESGGAGDGGEELQTVRLGNERFVIPEILFHPSDVGIQQMGVPEAIVDAINLCPE 318

  Fly   289 DLRKMLYQNIVLSGGSTLFKGFGDRLLSELKKHSAKDLKIRIAAPQERLYSTWMGGSILASLDTF 353
            :.|..|:.|||:.||..||.|...|:..:::..:..:..:.:..|:..:...|.||...:...:|
Mosquito   319 ETRPHLFANIVVCGGCALFPGMQSRVERDVRALAPDEYDVNVTVPENPITYAWHGGKKYSQSLSF 383

  Fly   354 KKMWISKREYEEEGQKAVHRK 374
            .|..:|:.||||.|.:.:..|
Mosquito   384 MKSCMSRNEYEEYGTRHLVEK 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 ASKHA_NBD_Arp1 9..375 CDD:466820 100/411 (24%)
Arp6XP_315883.4 ASKHA_NBD_Arp6 7..397 CDD:466816 97/399 (24%)

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