DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp1 and Acte1

DIOPT Version :9

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001356763.1 Gene:Acte1 / 102636989 MGIID:2685344 Length:382 Species:Mus musculus


Alignment Length:382 Identity:140/382 - (36%)
Similarity:213/382 - (55%) Gaps:20/382 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PVVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHV----------RVMAGALEGDIFVGPKAEEH 65
            |:|.|.|||..|.||:|...|:..||..:|:.||.          .|:.|..|.|.|:|.:.:.:
Mouse     5 PLVCDYGSGFSKVGFSGTQAPQAVFPTILGKMKHTGLSGPACVFQNVLEGLGEQDWFIGAETQTN 69

  Fly    66 RGLLSIRYPMEHGIVTDWNDMERIWSY-IYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFF 129
            |..|::.||:..|.:|:|:::|:||.| .|...|:|  .|.||:|:|||||..:..:.:..:..|
Mouse    70 RTELNMYYPISRGAITNWDNVEKIWHYSFYHSLQIA--PEQHPILITEAPLTSKEAKSRMTQILF 132

  Fly   130 EGINAPALFVSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYL 194
            |..|.|||:.:.||||||.|:||.:|..::||||:|:.||:..|:.:..|..::||||:|:|.||
Mouse   133 ETFNFPALYTANQAVLSLIASGRTSGTAIESGDGMTYFVPVMNGYPLHLSTTKLDIAGQDLTLYL 197

  Fly   195 KTLIRREGFNFRSTAEFEIVRSIKEKVCYLATNPQKEETVET-----EKFAYKLPDGKIFEIGPA 254
            ..|:...|....:.|:.|.:|.:|:|..|:|.:...|.:..:     :||.  |||||...:|..
Mouse   198 MKLLSDNGNVLETIADLEYIRDLKDKYSYVALDYNMEMSKTSAPSFQKKFT--LPDGKEINLGQE 260

  Fly   255 RFRAPEVLFRPDLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELK 319
            .|...||||...||.....|||.:.:.||...:...::.|:..|||:||::...|...|:..|:.
Mouse   261 AFMCSEVLFDTSLLERANPGIHMLTLESIMSCEKSHQRTLFNYIVLTGGTSACTGLRFRMQKEMA 325

  Fly   320 KHSAKDLKIRIAAPQERLYSTWMGGSILASLDTFKKMWISKREYEEEGQKAVHRKTF 376
            |..:.|..:::.|.....||.|:|.|||:||..||.|||:..||.|.|...:.|:.|
Mouse   326 KVVSPDFCVKVTASPYAKYSAWIGASILSSLPLFKDMWITNHEYLEIGPSVIFRRCF 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:302596 139/380 (37%)
ACTIN 9..376 CDD:214592 139/380 (37%)
Acte1NP_001356763.1 NBD_sugar-kinase_HSP70_actin 2..382 CDD:354300 139/380 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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