DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp1 and Acte1

DIOPT Version :10

Sequence 1:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001356763.1 Gene:Acte1 / 102636989 MGIID:2685344 Length:382 Species:Mus musculus


Alignment Length:382 Identity:140/382 - (36%)
Similarity:213/382 - (55%) Gaps:20/382 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PVVIDNGSGVIKAGFAGEHIPKCRFPNYIGRPKHV----------RVMAGALEGDIFVGPKAEEH 65
            |:|.|.|||..|.||:|...|:..||..:|:.||.          .|:.|..|.|.|:|.:.:.:
Mouse     5 PLVCDYGSGFSKVGFSGTQAPQAVFPTILGKMKHTGLSGPACVFQNVLEGLGEQDWFIGAETQTN 69

  Fly    66 RGLLSIRYPMEHGIVTDWNDMERIWSY-IYSKEQLATFTEDHPVLLTEAPLNPRRNREKAAEFFF 129
            |..|::.||:..|.:|:|:::|:||.| .|...|:|  .|.||:|:|||||..:..:.:..:..|
Mouse    70 RTELNMYYPISRGAITNWDNVEKIWHYSFYHSLQIA--PEQHPILITEAPLTSKEAKSRMTQILF 132

  Fly   130 EGINAPALFVSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYL 194
            |..|.|||:.:.||||||.|:||.:|..::||||:|:.||:..|:.:..|..::||||:|:|.||
Mouse   133 ETFNFPALYTANQAVLSLIASGRTSGTAIESGDGMTYFVPVMNGYPLHLSTTKLDIAGQDLTLYL 197

  Fly   195 KTLIRREGFNFRSTAEFEIVRSIKEKVCYLATNPQKEETVET-----EKFAYKLPDGKIFEIGPA 254
            ..|:...|....:.|:.|.:|.:|:|..|:|.:...|.:..:     :||.  |||||...:|..
Mouse   198 MKLLSDNGNVLETIADLEYIRDLKDKYSYVALDYNMEMSKTSAPSFQKKFT--LPDGKEINLGQE 260

  Fly   255 RFRAPEVLFRPDLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELK 319
            .|...||||...||.....|||.:.:.||...:...::.|:..|||:||::...|...|:..|:.
Mouse   261 AFMCSEVLFDTSLLERANPGIHMLTLESIMSCEKSHQRTLFNYIVLTGGTSACTGLRFRMQKEMA 325

  Fly   320 KHSAKDLKIRIAAPQERLYSTWMGGSILASLDTFKKMWISKREYEEEGQKAVHRKTF 376
            |..:.|..:::.|.....||.|:|.|||:||..||.|||:..||.|.|...:.|:.|
Mouse   326 KVVSPDFCVKVTASPYAKYSAWIGASILSSLPLFKDMWITNHEYLEIGPSVIFRRCF 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp1NP_524331.2 ASKHA_NBD_Arp1 9..375 CDD:466820 139/379 (37%)
Acte1NP_001356763.1 ASKHA_ATPase-like 4..373 CDD:483947 137/371 (37%)

Return to query results.
Submit another query.