DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp313a4 and Cyp4f40

DIOPT Version :9

Sequence 1:NP_650224.3 Gene:Cyp313a4 / 41563 FlyBaseID:FBgn0038076 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_038935701.1 Gene:Cyp4f40 / 503122 RGDID:1559596 Length:530 Species:Rattus norvegicus


Alignment Length:542 Identity:138/542 - (25%)
Similarity:214/542 - (39%) Gaps:138/542 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 WCGL--------LFLLWIYFLWSRRR----FYLLTLKIPGPLGYPILGMAHWLMRREDILNAFGC 59
            |.||        |.|..:...|...|    .|.|..|.....|:|......|          |..
  Rat     8 WLGLGPMSASPWLLLSLVGVSWFLTRCLTQIYTLYAKCQRLCGFPQPPKRSW----------FWG 62

  Fly    60 FLDKHGPT-----------------IFSWLGPI-PFMIVSDPQVVQDIFTSPHCV--NKGIIYKA 104
            .|....||                 ..:||||| |.:.:..|.:::.:.::...|  ..||.|..
  Rat    63 HLGMSPPTEEGMKQMTELVATYPQGFMTWLGPIVPLITLCHPDIIRSVLSASAAVAPKDGIFYSF 127

  Fly   105 VDDGAGVGLFSLKDPRWSIHRKLLNPAFGHKVLLSFLPIFNRETALLLDQLEPLQDDGEKDLIPL 169
            :....|.||......:||.||.:|.|||...:|..::.|||..|.::..:...|...|...|   
  Rat   128 LKPWLGDGLLVSASDKWSRHRSMLTPAFHFNILKPYVKIFNDSTNIMHAKWLRLASGGSAHL--- 189

  Fly   170 LQSFTLGIATQTTMGSDVKDEESFRSNSLLGRYQCILETMTDMCFSPWLNSRFCRQLAGKESHYY 234
                                 :.|.:.||:     .|:|:....||  .||. |::   |.|.|.
  Rat   190 ---------------------DMFENISLM-----TLDTLQKCVFS--FNSN-CQE---KPSEYI 222

  Fly   235 QAKTEIRQFIRK------------------------------------IIERKLAEDEMGALPSI 263
            .|..|:...:.|                                    |.||:....:.|....|
  Rat   223 AAILELSALVVKRNEQLLLHMDLLYRLTPDGRRFYKACHLVHDFTYAVIQERRRTLPKHGGDDVI 287

  Fly   264 QSNDKNLFLNLVTDLMRRGVFTLKNVED-----------ESNIIVFGAFETTANAVYYTLMLLAM 317
            ::..|:..|:.:      .|..|...||           |::..:|...:|||:.:.:.|..||.
  Rat   288 KAKAKSKTLDFI------DVLLLSKDEDGKELSDEDIRAEADTFMFEGHDTTASGLSWILYNLAK 346

  Fly   318 FPEYQERAFEEIKTIFPNTGDFDVSYA-------DTQQMVYLDLILNESMRVIPPVPVVSRQTSQ 375
            .||||||..:|::.:..:....::..:       |..|:.:|.:.:.||:|:.|||.:|||..:|
  Rat   347 HPEYQERCRQEVQELLRDRDSEEIECSCGVLLRDDLAQLPFLTMCIKESLRLHPPVTMVSRCCTQ 411

  Fly   376 DLKLSNGIVVPKGVQIAIDIYHMHRSKKIWGPDAETFNPDHFLPHNIQDKHPYAYIPFTKGIRNC 440
            |:.|.:|.|:|||:...|:|:..|.:..:| .|.|.::|..|.|.|||.:.|.|:|||:.|.|||
  Rat   412 DISLPDGRVIPKGIICIINIFATHHNPTVW-QDPEVYDPFRFDPENIQARSPLAFIPFSAGPRNC 475

  Fly   441 IGWRYALISAKVTLAKLLRNYR 462
            ||..:|:...||.:|..|..:|
  Rat   476 IGQTFAMNEMKVAVALTLLRFR 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp313a4NP_650224.3 p450 33..465 CDD:299894 128/504 (25%)
Cyp4f40XP_038935701.1 CYP4F 74..522 CDD:410772 121/466 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.