DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp313a4 and Cyp12c1

DIOPT Version :9

Sequence 1:NP_650224.3 Gene:Cyp313a4 / 41563 FlyBaseID:FBgn0038076 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001287109.1 Gene:Cyp12c1 / 40037 FlyBaseID:FBgn0036806 Length:524 Species:Drosophila melanogaster


Alignment Length:414 Identity:90/414 - (21%)
Similarity:175/414 - (42%) Gaps:65/414 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 VGLFSLKDPRWSIHRKLLNPA-FGHKVLLSFLPIFNRETALLLDQLEPLQDDGEKDLIPLLQSFT 174
            :|||. ....|..:|..:||. ..|:.:..:|....|.....::::..::|. |...:|.....|
  Fly   137 MGLFG-NGAEWGKNRSAVNPVLMQHRNVAIYLKPMQRVNRQFVNRIREIRDK-ESQEVPGDFMNT 199

  Fly   175 LGIATQTTMGSDVKDEE---------SFRSNSLLGRYQCILETMTDMCFSPWL--------NSRF 222
            :...|..::.:...|.|         ...::.|....:.::::..|:...|.|        ..:|
  Fly   200 INHLTFESVATVALDRELGLLREANPPPEASKLFKNIEVLMDSFFDLGVRPSLYRYIPTPTYKKF 264

  Fly   223 CRQLAGKESHYYQAKTEIRQFIRKIIERKLAE----DEMGALPSIQSNDKNLFLNLVTDLMRRGV 283
            .|.:   :..:......:.|.|.: |:||.::    |....|..:...|:.|.:.:..|::..||
  Fly   265 SRAM---DEIFDTCSMYVNQAIER-IDRKSSQGDSNDHKSVLEQLLQIDRKLAVVMAMDMLMGGV 325

  Fly   284 FTLKNVEDESNIIVFGAFETTANAVYYTLMLLAMFPEYQERAFEEIKTIFPNT-GDFDVSYADTQ 347
                              :||:.|:...|:.||..||.|:|..||:.:...:. .:|.|.  |.:
  Fly   326 ------------------DTTSTAISGILLNLAKNPEKQQRLREEVLSKLTSLHSEFTVE--DMK 370

  Fly   348 QMVYLDLILNESMRVIPPVPVVSRQTSQDLKLSNGIVVPKGVQIAIDIYHMHRSKKIWGPDAETF 412
            .:.||..::.||:|:.|.....:|....|:.| :|..:|||.::.:....:.:..::: |.|:.|
  Fly   371 SLPYLRAVIKESLRLYPVTFGNARSAGADVVL-DGYRIPKGTKLLMTNSFLLKDDRLY-PRAKEF 433

  Fly   413 NPDHFLPHNIQDK---------HPYAYIPFTKGIRNCIGWRYALISAKVTLAKLLRN----YRFK 464
            .|:.:|.....||         :.:.|:||..|.|.|:|.|...:..::|:|.|:||    |.:.
  Fly   434 IPERWLRRKDDDKSDVLMNKDLNAFIYLPFGFGPRMCVGKRIVDLEMELTVANLVRNFHIEYNYS 498

  Fly   465 TSFPFE-NLYFVEDITMKLKSVPL 487
            |..|:: ...:..:|.:|.|...|
  Fly   499 TEKPYKCRFLYKPNIPLKFKFTDL 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp313a4NP_650224.3 p450 33..465 CDD:299894 84/389 (22%)
Cyp12c1NP_001287109.1 p450 45..502 CDD:278495 85/392 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442749
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24305
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.