DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp313a4 and Cyp4f39

DIOPT Version :10

Sequence 1:NP_650224.3 Gene:Cyp313a4 / 41563 FlyBaseID:FBgn0038076 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_234837.3 Gene:Cyp4f39 / 299566 RGDID:1308796 Length:550 Species:Rattus norvegicus


Alignment Length:522 Identity:135/522 - (25%)
Similarity:242/522 - (46%) Gaps:69/522 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLFLLWIYFLWSRRRFYL-----LTLK----IPGPLGYPILGMAHWLMRREDIL--NAFGC---- 59
            |||||::.|....:.|.|     :|.:    .|.|.|      .|||:....:.  |..|.    
  Rat    28 LLFLLFLLFRLLLQAFKLFSDFRITCRRLSCFPEPPG------RHWLLGHMSMYLPNEKGLQNEK 86

  Fly    60 -FLDKHGPTIFSWLGP-IPFMIVSDPQVVQDIFTSPHCV--NKGIIYKAVDDGAGVGLFSLKDPR 120
             .||.....|.:|:|| :|.:::..|..::.:..:...:  .....|..:....|.||...|..:
  Rat    87 KVLDTMHHIILAWVGPFLPLLVLVHPDYIKPVLGASAAIAPKDEFFYSFLKPWLGDGLLISKGNK 151

  Fly   121 WSIHRKLLNPAFGHKVLLSFLPIFNRETALLLDQLEPLQDDGEK---DLIPLLQSFTLGIATQT- 181
            ||.||:||.|||...:|..::.|||:...::..:......:|..   |:...:...||....:. 
  Rat   152 WSRHRRLLTPAFHFDILKPYMKIFNQSVNIMHAKWRRHLAEGSVTSFDMFEHVSLMTLDSLQKCV 216

  Fly   182 -TMGSDVKDEES------FRSNSLLGRYQCILETMTDMCFSPWLNSRFCRQLAGKESHYYQAKTE 239
             :..||.:::.|      ...::|:.|.|..|....|          |...|......:.||...
  Rat   217 FSYSSDCQEKLSDYISSIIELSALVVRRQYRLHHYLD----------FIYYLTADGRRFRQACDT 271

  Fly   240 IRQFIRKII-ERKLAEDEMGALPSIQSND-KNL-FLNLVTDLMRRG----VFTLKNVEDESNIIV 297
            :..|..::| :|:.|..|:||...:::.. |.| |::::  |:.:.    ..:.:::..|::..:
  Rat   272 VHNFTTEVIQQRRRALRELGAEAWLKAKQGKTLDFIDVL--LLAKDEEGKELSDEDIRAEADTFM 334

  Fly   298 FGAFETTANAVYYTLMLLAMFPEYQERAFEEIKTIFPNTGDFDVSYADTQQMVYLDLILNESMRV 362
            |...:||::.:.:.|..||.:||||::..|||:.:.......::.:.|..|:.:..:.:.||:|.
  Rat   335 FEGHDTTSSGLSWALFNLAKYPEYQDKCREEIQEVMKGRELEELDWDDLTQLPFTTMCIKESLRQ 399

  Fly   363 IPPVPVVSRQTSQDLKLSNGIVVPKGVQIAIDIYHMHRSKKIWGPDAETFNPDHFLPHNIQDKHP 427
            .|||.::||:.::|:||.:|.::|||:...:.||..|.:..:| ||::.:||..|.|...|.:.|
  Rat   400 FPPVTLISRRCTEDIKLPDGRIIPKGIICLVSIYGTHYNPLVW-PDSKVYNPYRFDPDIPQQRSP 463

  Fly   428 YAYIPFTKGIRNCIGWRYALISAKVTLAKLLRNYRFKTSFPFENLYFVEDITMKLKSVPLLELQK 492
            .|::||:.|.|||||..:|:...:|.:|..|..:|...           |.|.|::..|  ||..
  Rat   464 LAFVPFSAGPRNCIGQSFAMAEMRVVVALTLLRFRLSV-----------DRTRKVRRKP--ELIL 515

  Fly   493 RT 494
            ||
  Rat   516 RT 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp313a4NP_650224.3 CYP313-like 65..489 CDD:410680 112/444 (25%)
Cyp4f39XP_234837.3 CYP4F 82..523 CDD:410772 118/462 (26%)

Return to query results.
Submit another query.