DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp313a4 and Cyp4a8

DIOPT Version :10

Sequence 1:NP_650224.3 Gene:Cyp313a4 / 41563 FlyBaseID:FBgn0038076 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_113793.2 Gene:Cyp4a8 / 266674 RGDID:628846 Length:508 Species:Rattus norvegicus


Alignment Length:543 Identity:132/543 - (24%)
Similarity:229/543 - (42%) Gaps:94/543 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LTWTLWCGLLF--------LLWIYFLWSRRRFYL-------LTLKIPGPLGYPILGMAHWLMRR- 50
            |::|::.|.:.        |..:..|:...:|||       .|.:.|.|       .:||.... 
  Rat     6 LSFTIFPGSILGFLQIATVLTVLLLLFKTAQFYLHRRWLLRATQQFPSP-------PSHWFFGHK 63

  Fly    51 -------EDILNAFGCFLDKHGPTIF-SWL-GPIPFMIVSDPQVVQDIF-----TSPHCVNKGII 101
                   :|||...     |:.|:.. .|| |....:.|.||..::.|.     .|.|.      
  Rat    64 IPKDQEFQDILTRV-----KNFPSACPQWLWGSNVRIQVYDPDYMKLILGRSDPKSHHS------ 117

  Fly   102 YKAVDDGAGVGLFSLKDPRWSIHRKLLNPAFGHKVLLSFLPIFNRETALLLDQLEPLQDDGEKDL 166
            |:.:....|.||..|....|..||::|.|||.:..|..::.|......::||:.|  |..|:...
  Rat   118 YRFLAPWIGYGLLLLNGQTWFQHRRMLTPAFHYDTLKPYVGIMADSVRIMLDKWE--QIVGQDST 180

  Fly   167 IPLLQSFTLGIATQTTMGSDVKDEESFRSNSLLGRYQCILETM--------------TDMCFSPW 217
            :.:.|..|| :...|.|......|.|.:.:.....|...:|.:              .|:.:|..
  Rat   181 LEIFQHITL-MTLDTIMKCAFSQEGSVQLDRKYKSYIKAVEDLNNLSFFRIRNIFHQNDIIYSLS 244

  Fly   218 LNSRFCRQLAGKESHYYQAKTEIRQFIRKIIERKLAEDEMGALPSIQSNDKNLFLNLVTDLMRR- 281
            .|.|..|      |.:..|.....|.|:   .||....:...|..::...:..||:::  |..| 
  Rat   245 SNGRKAR------SAWQLAHEHTDQVIK---SRKAQLQDEEELQKVKQKRRLDFLDIL--LFARI 298

  Fly   282 ---GVFTLKNVEDESNIIVFGAFETTANAVYYTLMLLAMFPEYQERAFEEIKTIFPNTGD-FDVS 342
               ...:.|::..|.:..:|...:|||:.:.:....||..||:|:...:||:::.   || ..::
  Rat   299 ENGSSLSDKDLRAEVDTFMFEGHDTTASGISWIFYALATNPEHQQGCRKEIQSLL---GDGASIT 360

  Fly   343 YADTQQMVYLDLILNESMRVIPPVPVVSRQTSQDLKLSNGIVVPKGVQIAIDIYHMHRSKKIWGP 407
            :.|..:|.|..:.:.|::|:.|||..|||..|..:...:|..:|||:.:.:..|.:|.:..:| |
  Rat   361 WDDLDKMPYTTMCIKEALRIYPPVTAVSRMLSTPVTFPDGRSLPKGITVMLSFYGLHHNPTVW-P 424

  Fly   408 DAETFNPDHFLPHNIQDKHPYAYIPFTKGIRNCIGWRYALISAKVTLAKLLRNYRF---KTSFPF 469
            :.|.|:|..|.|.:  .:|.::::||:.|.|||||.::|:...||.:|..|..:..   .|..|.
  Rat   425 NPEVFDPYRFAPES--SRHSHSFLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPI 487

  Fly   470 ENLYFVEDITMKLKSVPLLELQK 492
            .    :..:.:|.|:...|.|:|
  Rat   488 P----IPRLVLKSKNGIYLRLKK 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp313a4NP_650224.3 CYP313-like 65..489 CDD:410680 112/452 (25%)
Cyp4a8NP_113793.2 CYP4B-like 70..503 CDD:410771 116/467 (25%)

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