DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp313a4 and Cyp4a2

DIOPT Version :10

Sequence 1:NP_650224.3 Gene:Cyp313a4 / 41563 FlyBaseID:FBgn0038076 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001038235.1 Gene:Cyp4a2 / 24306 RGDID:2479 Length:504 Species:Rattus norvegicus


Alignment Length:532 Identity:132/532 - (24%)
Similarity:228/532 - (42%) Gaps:102/532 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLFLLWIYF----LWSRRRFYLLTL-KIPGPLGYPILGMAHWLMRR-------EDILNAFGCFLD 62
            ||.|..:.|    .:.||::.|..| |.|..       .:|||...       :.:|.    :::
  Rat    24 LLSLFLVLFKAVQFYLRRQWLLKALEKFPST-------PSHWLWGHNLKDREFQQVLT----WVE 77

  Fly    63 KHGPTIFSWL-GPIPFMIVSDPQVVQDIF--TSPHCVNKGIIYKAVDDGAGVGLFSLKDPRWSIH 124
            |.......|| |....:::.||..|:.:.  :.|.      .|:::....|.||..|...:|..|
  Rat    78 KFPGACLQWLSGSTARVLLYDPDYVKVVLGRSDPK------PYQSLAPWIGYGLLLLNGKKWFQH 136

  Fly   125 RKLLNPAFGHKVLLSFLPIFNRETALLLDQLEPLQD-DGEKDLIPLLQSFTL------GIATQTT 182
            |::|.|||.:.:|..::.|.....:::||:.|.|.| |...::...:...||      ..:.|.:
  Rat   137 RRMLTPAFHYDILKPYVKIMADSVSIMLDKWEKLDDQDHPLEIFHYVSLMTLDTVMKCAFSHQGS 201

  Fly   183 MGSDVKD------------------EESFRSNSLLGRYQCILETMTDMCFSPWLNSRFCRQLAGK 229
            :..||..                  ..:|..||::          .:|.....|:.|.|      
  Rat   202 VQLDVNSRSYTKAVEDLNNLIFFRVRSAFYGNSII----------YNMSSDGRLSRRAC------ 250

  Fly   230 ESHYYQAKTEIRQFIRKIIERKLAEDEMGALPSIQSNDKNLFLNLVTDLMRRGVFTLKNVEDES- 293
                 |...|....:.|..:.:|..:|     .:|...|...|:.:..|:...:...|::.||. 
  Rat   251 -----QIAHEHTDGVIKTRKAQLQNEE-----ELQKARKKRHLDFLDILLFAKMEDGKSLSDEDL 305

  Fly   294 ----NIIVFGAFETTANAVYYTLMLLAMFPEYQERAFEEIKTIFPNTGD-FDVSYADTQQMVYLD 353
                :..:|...:|||:.:.:....||..||:|||..||:::|.   || ..|::....||.|..
  Rat   306 RAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSIL---GDGTSVTWDHLDQMPYTT 367

  Fly   354 LILNESMRVIPPVPVVSRQTSQDLKLSNGIVVPKGVQIAIDIYHMHRSKKIWGPDAETFNPDHFL 418
            :.:.|::|:..|||.|||:.|..:...:|..:|||:::.|.||.:|.:...| |:.:.|:|..|.
  Rat   368 MCIKEALRLYSPVPSVSRELSSPVTFPDGRSIPKGIRVTILIYGLHHNPSYW-PNPKVFDPSRFS 431

  Fly   419 PHNIQDKHPYAYIPFTKGIRNCIGWRYALISAKVTLAKLLRNYRF---KTSFPFENLYFVEDITM 480
            |.:  .:|.:||:||:.|.|||||.::|:...||.:|..|..:..   .|..|..    :..:.:
  Rat   432 PDS--PRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPVP----MPRLVL 490

  Fly   481 KLKSVPLLELQK 492
            |.|:...|.|:|
  Rat   491 KSKNGIHLRLKK 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp313a4NP_650224.3 CYP313-like 65..489 CDD:410680 114/460 (25%)
Cyp4a2NP_001038235.1 CYP4B-like 69..499 CDD:410771 116/475 (24%)

Return to query results.
Submit another query.