Protein Alignment mbo and Nup88

DIOPT Version :10

• Sequence 1: NP_524330.2
• Gene: mbo / 41562
• FlyBaseID: FBgn0026207
• Length: 702
• Species: Drosophila melanogaster
• Sequence 2: NP_446068.1
• Gene: Nup88 / 113929
• RGDID: 620182
• Length: 742
• Species: Rattus norvegicus
• Alignment Length: 754
• Identity: 203/754 - (26%)
• Similarity: 345/754 - (45%)
• Gaps: 108/754 - (14%)

  Fly    14 LFAKIRNG----------------------LPVVQRTQNLLDCKDDLLFAWHAKDSCLLVRNWRS 56
            :|.::|.|                      ||....|:||:......||.|.|:.|..||...|.
  Rat    23 VFLRLREGLKNQSPAEADKPATSTSPSCPPLPPHLPTRNLVFGLGGELFLWDAEGSAFLVVRLRG 87

  Fly    57 SLAAKVN---IQFQTLIPSSLVSLEVDRVLASNEGSLVALSGPRGVVIMELPRRWGPDGYYKDGK 118
            .....|.   .|:|.|:..:....|:.:||.|.....|||.|.:|::.:|||:|||.|..::.||
  Rat    88 PSGGSVEPPLSQYQRLLCINPPLFEIHQVLLSPTQHHVALIGTKGLMALELPQRWGKDSEFEGGK 152

  Fly   119 PVITCRTFGLDTQLFLKNPHLEVRQVRWHPHSVSDSTLLVLLNNNTIRVYNHSKLRHVWQVGPPV 183
            ..:.|.|..:..:.|..:..|.::...|:|..:.|..:::|.::|.||:|:..:.:...:|  .|
  Rat   153 ATVNCSTIPIAERFFTSSTSLTLKHAAWYPSEMLDPHIVLLTSDNVIRIYSLREPQTPTKV--IV 215

  Fly   184 LRSGANNSL---------CDFGELAVDFDIAPAAKPRVTEPETAGNNETTLDKSNKTLVAAKSLP 239
            |......||         ...||.||.||..|                  |...:|.:...|.
  Rat   216 LSEAEEESLILNKGRAYTASLGETAVAFDFGP------------------LVTVSKNMFEQKD-- 260

  Fly   240 KQERIEWPMVVLRENGN---IYILMTGVDSENTRLQGPVTITPQAHDNYGLESCALMIIPSLPPT 301
             :|.:.:|:.:|.|||.   .|:.:........:|.||:.:.|.|.||||.::||::.:|.:|..
  Rat   261 -REAVAYPLYILYENGETFLTYVSLLHSPGNIGKLLGPLPMHPAAEDNYGYDACAILCLPCVPNI 324

  Fly   302 IVIAESNGKLHHALLMEAEATEHSFNEVDDSVLIEP----AEYV--VHVLETVELELGISAPATG 360
            :|||..:|.|:|.:::|.|       |.||..|.:.    |:.:  ::|.|.|||||.:...:..
  Rat   325 LVIATESGMLYHCVVLEGE-------EDDDQTLEKSWDPRADLIPSLYVFECVELELALKLASAE 382

  Fly   361 KE----GGNCPIYLKRDLINELRYFAYHNAGLHAVTVSFIAELQRYLES-ESDEDRL-ELAVSAS 419
            .:    ..:|||.|.||.....||...|.||:|:|.:::|.:|.::|.| |.|:|.| ||.....
  Rat   383 DDPFASDFSCPIKLHRDPKCPSRYHCSHEAGVHSVGLTWIHKLHKFLGSDEEDKDSLQELTAEQK 447

  Fly   420 --AEYILCTKFDSSETVNAVFGLALLQIPAGIVLLLGSGQVISLKLVIDAQLLVTPNENKP---- 478
              .|:|||||.........:.|..::....|..::.    :.|....:...||.|.:...|
  Rat   448 CFVEHILCTKPLPCRQPAPIRGFWIVPDILGPTMIC----ITSTYECLIRPLLSTVHPASPPLLC 508

  Fly   479 --VDSEVSQQ------ESGPPFVDTIKSLLQRSVNQPIL---ADKLSSPSAQESFELLNQAIEVL 532
              .|:.|::.      |:...|...||.:||||...|.|   ::|..:|..:|..:|:::|.:|.
  Rat   509 TREDAGVAESPLRILAEAPDSFEKHIKRILQRSAANPALLKSSEKDLAPPPEECLQLISRATQVF 573

  Fly   533 REQYLKRHDLVRAAFTRHINQIQLKKEQQLQEIQDLEQERELISERAHKLAERFEEISYNQELLV 597
            ||||:.:.||.:....|.:..:..:|.:||:::....:||:.:.|.|.:||:::||....||.::
  Rat   574 REQYILKQDLAKEEIQRRVKLLCDQKRKQLEDLNYCREERKSLREMAERLADKYEEAKEKQEDIM 638

  Fly   598 RKCNALMQRANASLPNSVIAEREFSQEVIRLNKVTQSLAAGLE--TAKKTFNKQRYHIAQSQEDL 660
            .:...::...:..||....:||:..:|:..:....:.|...::  |.||.:.:::.....|.:
  Rat   639 NRMKKVLHSFHTQLPVLSDSERDMKKELQLIPDQLRHLGNAIKQVTMKKDYQQRKMEKVLSPQ-- 701

  Fly   661 KKNAYELPEKQHRTITEILTQLTGEIDRQITDVKRINKI 699
             |....|...|.:.|..||.: .||..|::  ||:||.|
  Rat   702 -KPTITLSAYQRKCIQSILKE-EGEHIREM--VKQINDI 736

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mbo	NP_524330.2	Nup88	4..701	CDD:462975	203/754 (27%)
Nup88	NP_446068.1	Nup88	14..741	CDD:462975	203/754 (27%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	34..54		0/19 (0%)