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Protein Alignment Gnmt and Gnmt

DIOPT Version :9

Sequence 1:	NP_650223.1	Gene:	Gnmt / 41561	FlyBaseID:	FBgn0038074	Length:	289	Species:	Drosophila melanogaster
Sequence 2:	NP_058780.1	Gene:	Gnmt / 25134	RGDID:	2719	Length:	293	Species:	Rattus norvegicus

Alignment Length:	291	Identity:	170/291 - (58%)
Similarity:	207/291 - (71%)	Gaps:	12/291 - (4%)

- Green bases have known domain annotations that are detailed below.

  Fly     6 DSVFVARSDGISAEGVRDQYADGKAAKVWEIFIGDKNSRTDNYKNFLIDMLRNKGCKRVLDVACG 70
            |||:..||.|::|||:.||||||:||:||:::|||..|||..||.:|:.:||..||.||||||||
  Rat     3 DSVYRTRSLGVAAEGIPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCHRVLDVACG 67

  Fly    71 TGVDSLMLVEEGFEVVSVDASDKMLKYALKERWARRNEAAFDKWVIEEANWLTLYDDIQEHIQDG 135
            |||||:|||||||.|.|||||||||||||||||.||.|.|||||||||||||||..|:.  ..||
  Rat    68 TGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVP--AGDG 130

  Fly   136 FDAVICLGNSFAHLMDGFGDQREHKQAIGNFEKCLKPGGVLLIDHRNYDNILETG-ATPAKSIYY 199
            ||||||||||||||.|..|||.||:.|:.|....::|||:|:|||||||.||.|| |.|.|:|||
  Rat   131 FDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYILSTGCAPPGKNIYY 195

  Fly   200 NTSHTADIKTSVLFYCGKPALVSMDYLIA-------GNKLTSEFRLSYYPHGLKRFQEILAEIFS 257
            .:..|.||.||||....|..:|::||.:.       |....|:||||||||.|..|.|::.|.|.
  Rat   196 KSDLTKDITTSVLTVNNKAHMVTLDYTVQVPGAGRDGAPGFSKFRLSYYPHCLASFTELVQEAFG 260

  Fly   258 AKAKHQLYGDFK--EMSQVKNPAFYIHLIEK 286
            .:.:|.:.||||  ...|...|.::||:::|
  Rat   261 GRCQHSVLGDFKPYRPGQAYVPCYFIHVLKK 291

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.