DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gnmt and Gnmt

DIOPT Version :10

Sequence 1:NP_650223.1 Gene:Gnmt / 41561 FlyBaseID:FBgn0038074 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_001400081.1 Gene:Gnmt / 14711 MGIID:1202304 Length:301 Species:Mus musculus


Alignment Length:299 Identity:167/299 - (55%)
Similarity:208/299 - (69%) Gaps:20/299 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DSVFVARSDGISAEGVRDQYADGKAAKVWEIFIGDKNSRTDNYKNFLIDMLRNKGCKRVLDVACG 70
            |||:..||.|::|||:.||||||:||:||:::|||..|||..||.:|:.:||..||.||||||||
Mouse     3 DSVYRTRSLGVAAEGLPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCHRVLDVACG 67

  Fly    71 TG--------VDSLMLVEEGFEVVSVDASDKMLKYALKERWARRNEAAFDKWVIEEANWLTLYDD 127
            ||        |||:|||||||.|:|||||||||||||||||.||.|.:||.|||||||||||..|
Mouse    68 TGPPFLTSSRVDSIMLVEEGFSVMSVDASDKMLKYALKERWNRRKEPSFDNWVIEEANWLTLDKD 132

  Fly   128 IQEHIQDGFDAVICLGNSFAHLMDGFGDQREHKQAIGNFEKCLKPGGVLLIDHRNYDNILETG-A 191
            :..  .||||||||||||||||.|..|||.||:.|:.|....::|||:|:|||||||.||.|| |
Mouse   133 VLS--GDGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYILSTGCA 195

  Fly   192 TPAKSIYYNTSHTADIKTSVLFYCGKPALVSMDYLIA-------GNKLTSEFRLSYYPHGLKRFQ 249
            .|.|:|||.:..|.||.||||....|..:|::||.:.       |:...|:||||||||.|..|.
Mouse   196 PPGKNIYYKSDLTKDITTSVLTVNNKAHMVTLDYTVQVPGTGRDGSPGFSKFRLSYYPHCLASFT 260

  Fly   250 EILAEIFSAKAKHQLYGDFK--EMSQVKNPAFYIHLIEK 286
            |::...|..:.:|.:.||||  :..|...|.::||:::|
Mouse   261 ELVRAAFGGRCQHSVLGDFKPYKPGQAYVPCYFIHVLKK 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GnmtNP_650223.1 UbiE 40..178 CDD:441828 94/145 (65%)
GnmtNP_001400081.1 UbiG 37..181 CDD:441829 99/151 (66%)

Return to query results.
Submit another query.