DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dtg and Rp1

DIOPT Version :9

Sequence 1:NP_650220.2 Gene:Dtg / 41558 FlyBaseID:FBgn0038071 Length:612 Species:Drosophila melanogaster
Sequence 2:XP_008761780.1 Gene:Rp1 / 681377 RGDID:1596713 Length:2150 Species:Rattus norvegicus


Alignment Length:721 Identity:140/721 - (19%)
Similarity:241/721 - (33%) Gaps:253/721 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 NETATALPVV----------ELKVAESNPVDPVE------------ATDNFV--SVYGGNLEQDI 117
            :|||..|.|:          :||.|.:|.|:..:            |..|.:  |::..:..::.
  Rat  1164 SETAALLDVLKHVAITEEADDLKAAVANLVESTKTCSGPSGREQDTAPANCIAASLHSVDKCKEN 1228

  Fly   118 KNDVNSEVEDAPS------PVEPIIEEVQKVAEAELENHEIKLAVQSAREPK-------SLDAEE 169
            |:...|.:::..|      |...::|.|.|......|.|.:.:..    .||       :|....
  Rat  1229 KSTQKSLLDEGYSVRGDCGPELCVLEMVSKSNNTPSEGHTVSMTY----PPKGVNNQNDALFTSN 1289

  Fly   170 ESKTI----------------------------------------DEDRLENQD---------KA 185
            :|.|:                                        ||..:..:|         |.
  Rat  1290 DSSTMSQRSTHNASFLGEACLLTDSLCSHKACAQKDNIYEAACLSDETHIPIRDCKTIEFVNSKE 1354

  Fly   186 ETVTDNIAVSSEQMESHIRPLPNVTSDL----VSVILNE-DKAITEQPITKTNL--LALEQEH-- 241
            ...|||:.::.|     |:.:..|..||    .|:..|| |.:.:.|.:.|.:.  :.|.:.|  
  Rat  1355 NKCTDNLELTEE-----IKTVDKVPKDLNILADSIDKNESDISTSSQNVNKLSSQGIFLSKTHLD 1414

  Fly   242 --EKFEEIDESTTVPVYEEPKHQVTKKQGV----EDPSTVEIPPEV------------SDEQHFD 288
              :.:..::|....|    ||..|.||:.|    ||..|.|.|..:            |:.:.|:
  Rat  1415 SDKDYSPLEEFQNCP----PKKIVNKKKSVSSDKEDSRTSEEPRSITNSVTSSERNATSELESFE 1475

  Fly   289 PSEEPQT------VR-DERNLEEHDDNQNE-------IN---ENIIE-GEEAPAKTSTTAGPLVT 335
            .||...|      || :|:..:|....::|       ||   .|||| |....|...||....||
  Rat  1476 ESESQDTGIFNMKVRTEEKAAKESMQKESEARMSLELINISGRNIIEQGRRNTAFLETTGRGQVT 1540

  Fly   336 -------------VEPTKSITEPNEEIEKKAEA-EAKAEMEEQVEVN----TP-SVDATVVAADP 381
                         .|...|:.|....::|..:: |.::..:..:..|    :| ::|.:...:|.
  Rat  1541 PPSLVFCYDSNKNTEKEMSVGETKMRVKKIVDSMENESYTDSSLNCNKQHRSPGTLDWSDYGSDS 1605

  Fly   382 D----------EAQDEV--------IVAETTVEAITEAAKI--------------VVEEEPKEDV 414
            :          |..|:.        .:....:|.:...|:|              |....|.|..
  Rat  1606 ESRYPCKALSYEHSDDTGQEREYPRGIVRRAIEKLYGKAEIIKPPFFHGSIHKSQVCPYNPVEVP 1670

  Fly   415 SVQQEHLKEQRVQT------VSESNRQASPTEEPIKEVIFPKGDDESPVEGDSS-ESDEKPTERA 472
            .|::.|..|...|:      ||.|:......:|..:..:...|..:|  .|||| |...||:|..
  Rat  1671 CVKKTHFYESECQSLVSSEQVSRSSLMLQEFQEERQSEVDANGMGDS--FGDSSIEKVTKPSEHG 1733

  Fly   473 IVDDDSSEEQNEDVVDEGK-------------------SSSDDSTATPLVSYPPHDAGQTFDSNS 518
            .|   ..|::...::|.||                   .::|.::...|:           |.||
  Rat  1734 RV---FMEKEKGKLIDNGKWLLRENHLWRVSLDNPGMYGNADTTSVDTLM-----------DKNS 1784

  Fly   519 AD---EHSAQLS-GATNYRSTLIIALCSGTAVIFIVASLVIFVVSFQRQHGTLDIEMQEQRLGKD 579
            .:   .|..:|: |.|       :|..|.:.:..:...|.:....|...||:     ..:..|:|
  Rat  1785 IEVPYSHFGELAPGPT-------MAELSSSEIEEMTQPLEVKCNYFNFPHGS-----DSEPFGED 1837

  Fly   580 IQEEDN 585
            ..:..|
  Rat  1838 FLDAQN 1843

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DtgNP_650220.2 PTZ00341 <112..325 CDD:173534 64/319 (20%)
rne <303..445 CDD:236766 39/209 (19%)
DUF3295 <410..>498 CDD:288540 26/113 (23%)
Rp1XP_008761780.1 DCX 60..135 CDD:176357
DCX 182..257 CDD:176357
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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