DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dtg and Lmpt

DIOPT Version :9

Sequence 1:NP_650220.2 Gene:Dtg / 41558 FlyBaseID:FBgn0038071 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_996113.2 Gene:Lmpt / 39889 FlyBaseID:FBgn0261565 Length:2147 Species:Drosophila melanogaster


Alignment Length:882 Identity:170/882 - (19%)
Similarity:283/882 - (32%) Gaps:313/882 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ASISKSRASSCS-----------------SRKRLH--------LQPGSLLCVIVFCLLASCSAQP 41
            ||::.||:.|.|                 :.:.|.        :..|.|.|..|..||.| :...
  Fly   776 ASVNPSRSRSASRNPSPAPKNVANLMDGDTERSLEVYDDTQEGVMAGELNCESVLQLLES-NLNE 839

  Fly    42 IESTSLPAEVDDV-----EGTTILPI---QLEES---------------------------SPTP 71
            .|||:...:|..|     :|.:|||:   .||.|                           ||.|
  Fly   840 TESTNDQLQVQTVADDARDGKSILPMVHEPLESSALGAVLEERGREPSVGRIQSRSRSRSRSPLP 904

  Fly    72 -------------EPIIKNETATALPVVELKVAESNPVD--PVEATDNFVSVYGGNLEQDIKNDV 121
                         |.:||.....|     .:::.|:|.|  .:|.:||      |.|...::..:
  Fly   905 TSENLEKSIHKRRERLIKQNDELA-----ERLSHSSPEDSMEIETSDN------GRLSPTLEVTL 958

  Fly   122 NSEVEDAPSPVEPIIEEV-QKVAEAELENHEIKLAVQSAREPKSLDAEEES-------------K 172
                   |.||..|.|.. :.:.:||....|::|.|::.|..::..:...|             |
  Fly   959 -------PQPVIEINEMADEPMEDAETTPEEMRLFVETLRAERNARSRSRSRSRSPLPTAGNIEK 1016

  Fly   173 TIDEDRLE----NQDKAE--------------------------TVTDNIAVSSEQMESHIRPLP 207
            :::..||:    |.:..|                          |::..||...|:..||....|
  Fly  1017 SLESRRLKRIQHNDEIFEKLHDQMSSPQIIIESASPPSLPLPLPTISIEIAEPPEENASHTEAEP 1081

  Fly   208 NVTSDLVSVILNE-------------------DKAITEQPITKTNLLALEQEHEKFEEIDESTTV 253
            ..|.:.::.:..:                   ..|..||.:.|.....:.|..:.||.:.|....
  Fly  1082 EDTPESMARLFEQLRLNRVRSHSRSRSRSPLPTPANLEQSVQKRRERLIAQNDQFFEVLQERART 1146

  Fly   254 PVYEEPKHQVTKKQGVEDPSTVEIPPEVSDEQHFDPSEEPQTVRDERNLEEHDDNQNEINENIIE 318
            |   ||:.::|.:...|   .|:...|...|.....|..|...|.:...:..||....:|   :|
  Fly  1147 P---EPETRLTVEYVYE---YVQEKDEQVGEGRDKRSLSPSRSRSQSQEKALDDFHLMLN---LE 1202

  Fly   319 GEEAPA--KTSTTAGPLVTV---------EPTKSITEPNEEIEKKAEAEAKAEMEEQVEV--NTP 370
            |.|...  |.|.....::.|         :..:.:...|||||.:..:...:|:|..||:  ..|
  Fly  1203 GSELRTLRKNSEELESVLAVGAKQREVDMDALEKLHNANEEIELRVLSPTNSELERVVEMTRENP 1267

  Fly   371 SVDATV--VAADPDEAQDEVIVA----ETTV------------EAITEAAKIVVEEEP------- 410
            .:|.||  ||.|   .|||::.:    .|.|            |...|||:......|       
  Fly  1268 DMDRTVSEVARD---LQDELMASGFKRSTYVGESLDLGSDQFKELRREAAQFQRSRSPSPGSSMD 1329

  Fly   411 --KEDVSVQQE-------HLKEQRV----QTVSES-----------------------NRQASPT 439
              :|..:.|:|       .|.|.|:    :|.||.                       .|..|.:
  Fly  1330 YAREQAAAQRELQTAILDSLTESRLGAKPKTYSEERTGEFEDISAAQLDDLRHRTAEFQRSRSQS 1394

  Fly   440 EEPIKEVIFPKGDDESPVEGDSSESD------EKPTERAIVDDDSSEEQNEDVVDEGKSSSDD-- 496
            ..|::||...:..|   :|.:|::.:      ::....:|..::.|...|.|.:|..:.:||.  
  Fly  1395 RSPLREVELTQLRD---IEAESAKRELQDQLLDRLAASSINFENFSRHLNADFLDSERRASDSAL 1456

  Fly   497 -----------------STATPLVSYPPHD------------------AGQTFDSNSADEHSAQL 526
                             :...|:..||..|                  ..:.|.::..::.|...
  Fly  1457 MGDMEPDEYHHFRRYSLAQEQPVEEYPSDDYVYISQIEVRTLTGTRTWLKEDFYTHEPNDFSDSK 1521

  Fly   527 SGATNYRSTLIIALCSGTAVIFIVASLVIFVVSFQRQHGTLDIEMQEQRLGKD-------IQEED 584
            |...:..|.....|.:........::..|:.......|..||.|.......:|       |.:||
  Fly  1522 SPVRDEDSWARAVLAAEAEAAEFDSTNAIYSYDIVGDHENLDQERSSSNDSEDTRQTVVEIDDED 1586

  Fly   585 NVQMKLLDVDLSSPVILPMGNE----------ETDEC 611
            ..:.: ||..:|.      .||          :|.||
  Fly  1587 EFEFE-LDEGISD------NNERTQPTDESHHDTSEC 1616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DtgNP_650220.2 PTZ00341 <112..325 CDD:173534 51/277 (18%)
rne <303..445 CDD:236766 47/215 (22%)
DUF3295 <410..>498 CDD:288540 25/155 (16%)
LmptNP_996113.2 GBP_C <103..201 CDD:303769
ARGLU 110..255 CDD:291991
coiled coil 170..181 CDD:293879
coiled coil 190..201 CDD:293879
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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