DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dtg and Rp1

DIOPT Version :9

Sequence 1:NP_650220.2 Gene:Dtg / 41558 FlyBaseID:FBgn0038071 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_035413.1 Gene:Rp1 / 19888 MGIID:1341105 Length:2095 Species:Mus musculus


Alignment Length:710 Identity:130/710 - (18%)
Similarity:237/710 - (33%) Gaps:224/710 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 IESTSLPAEVDDVEGTTILPIQLEESSPT--------PEPIIKNETATALPVVELKVAESNPVDP 98
            ::..::..|.||::...   ..|.||:.|        .:.:..|.||::|..|:    |.|....
Mouse  1152 LKHVAITEEADDLKAAV---ANLMESTKTCSGSSGREQDMLPVNCTASSLHSVD----ECNENGS 1209

  Fly    99 VEAT--DNFVSVYGGNLEQDIKNDVNSEVE----DAPSPVEPIIEE------------------- 138
            .:.|  |...||.|....:.:....||..|    ...:|.:.:.::                   
Mouse  1210 AQKTLLDEGYSVMGDCTSEMVSKSCNSSCEMHMVSKTNPPKQVDDQSDGLLTSNSCTVSQRSTGA 1274

  Fly   139 -------------VQK--VAEAELENHEIKLAVQSAREPKSLDAEEESKTIDEDRLENQDKAETV 188
                         .||  |.|....:.|..:.::......|:.::|...|.|.:..|.....:.|
Mouse  1275 CFLTDGVYSHEACAQKEGVYEGACLSDETHIPIRDCHTIHSVHSKENKCTDDLESTEELKTVDKV 1339

  Fly   189 TDNIAVSSEQMESHIRPLPNVTSDLVSVILNEDKAITEQPITKTNLLALEQEHEKFEEIDESTTV 253
            ...:::.::.|..:        ...||...|.:|..:::.:.....|..::::...||...... 
Mouse  1340 PKGLSILADSMYKN--------DSNVSTFQNVNKLSSQRTLLSKTYLDSDKDYSPLEEFQNCPR- 1395

  Fly   254 PVYEEPKHQVTKKQGVEDPSTVEIPPEVSDEQHFDPSEEPQTVRD-----ERN----------LE 303
                  |..|.||:.:.           ||::....||||:::.:     |||          ||
Mouse  1396 ------KKIVNKKKSIS-----------SDKEESRTSEEPRSITNSMTSSERNAISELESFEELE 1443

  Fly   304 EHD-------------------DNQNE-------IN---ENIIEGEEA-PAKTSTTAGPLVTVEP 338
            ..|                   ..|:|       ||   ..|||.|.. .|...|||...||...
Mouse  1444 SQDTSIFNMNVRAEKKSTKETMQKQSEARMSSELINVSGRKIIEQERRNTAILETTARGQVTPPS 1508

  Fly   339 TKSITEPNEEIEKK-AEAEAKAEMEEQVEV-----------------NTP-SVDATVVAAD---- 380
            .....:.|:..||: :|.|.|..:::.|:.                 .:| ::|.:...:|    
Mouse  1509 LAFCYDSNKNTEKEISEGETKMRVKKMVDSMENESYSESSLNFKKHHRSPGTLDWSDYGSDSESG 1573

  Fly   381 -----------PDEAQDEVI---VAETTVEAITEAAKIV--------VEEE---PKEDVSVQ--- 417
                       .|..|::..   :.:..:|.:...|:|:        :.:.   |...|.||   
Mouse  1574 YPCKASSNSHNDDSGQEKEPTRGIVKRAIEKLYGKAEIIKPPFFHGSIHKSQVCPYNSVEVQCAK 1638

  Fly   418 QEHLKEQRVQTVSESNRQASPTEEPIKEVIFPKGDDESPVEGDSSESDEKPTERAIVDDDSSEEQ 482
            :.:..|...|:: .|:.|.|.:....:|  ||:.|.....:.....|.|..|:.:..|...:|::
Mouse  1639 KTNFYESECQSL-VSSEQVSRSSLIFQE--FPQVDANGMGDSFGDSSIENVTKSSAHDRVFTEKE 1700

  Fly   483 NEDVVDEGK----------SSSD--------DSTATPLVSYPPHDAGQTFDSNSAD---EHSAQL 526
            |..::|.||          .|||        |:|:...:          .|.||.:   .|..:|
Mouse  1701 NGKLIDNGKWLLRENHLWRVSSDNPGMYGNADTTSVDTL----------IDKNSIEVPYSHFGEL 1755

  Fly   527 S-GATNYRSTLIIALCSGTAVIFIVASLVIFVVSFQRQHGTLDIEMQEQRLGKDIQEEDN 585
            : |.|       :|..|.:.:..:...|.:....|...||:     ..:..|:|..:..|
Mouse  1756 APGPT-------MAELSSSEIEEMTQPLEVKCNYFNFPHGS-----DSEPFGEDFPDAQN 1803

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DtgNP_650220.2 PTZ00341 <112..325 CDD:173534 47/295 (16%)
rne <303..445 CDD:236766 40/222 (18%)
DUF3295 <410..>498 CDD:288540 26/108 (24%)
Rp1NP_035413.1 DCX 35..110 CDD:176357
DCX 157..232 CDD:176357
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 358..379
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 643..688
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 863..887
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1400..1430 8/40 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1572..1595 2/22 (9%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1181
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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