DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6753 and Lipa

DIOPT Version :10

Sequence 1:NP_650219.2 Gene:CG6753 / 41557 FlyBaseID:FBgn0038070 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_036864.3 Gene:Lipa / 25055 RGDID:3008 Length:397 Species:Rattus norvegicus


Alignment Length:375 Identity:124/375 - (33%)
Similarity:197/375 - (52%) Gaps:28/375 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 IQNDGYNVERHSVTTKDGYVLTLHRIP-----QVD--PELGSLLRRPVVFLLSGLYASSDVWLLN 96
            |.:.||..|.|||.|.|||:|.:||||     |.|  |       :|||:|..|..|.|..|:.|
  Rat    39 IMHWGYPGEEHSVQTGDGYILGVHRIPHGRKNQFDKGP-------KPVVYLQHGFLADSSNWVTN 96

  Fly    97 GREDSLAYLLWRAGYDVWLGNNRGNIYCRKNMWRNTTEREFWDFSWHEMGVYDLPAQVDYVLRTT 161
            ...:||.::|..||:|||:||:|||.:.||:...:.::.|:|.||:.||..|||||.::|:|..|
  Rat    97 IDNNSLGFILADAGFDVWMGNSRGNTWSRKHKTLSVSQDEYWAFSFDEMAKYDLPASINYILNKT 161

  Fly   162 GQKAMHFVGISQGGTVFLVLNSMMPQYNAVFKSATLLAPVAYVSNTKSGLAKVIGPVLGTRNYVS 226
            ||:.:::||.|||.|:..:..|.||:.....|....||||.       .|....||::.......
  Rat   162 GQEQLYYVGHSQGCTIGFIAFSQMPELAKKVKMFFALAPVL-------SLNFASGPMVKLGRLPD 219

  Fly   227 KMLE---GVEMFSTNKFFKKFLSM-TCLENEKPLVCISRLWPAVGYDTRFLNKTLLPDLMANFPA 287
            .:||   |.:.|.......|:||. .|.......:|.:..:...|::.:.||.:.:.....:.||
  Rat   220 LLLEDLFGQKQFLPQSAMVKWLSTHICTHVIMKELCANIFFLICGFNEKNLNMSRVDVYTTHCPA 284

  Fly   288 GGSVKQLMHYFQGYVSTRFRQYDYG-PERNWLHYQQLEPPEYALENVSTPVTVFFSENDYIVAPA 351
            |.||:.::|:.|.....:.:.:|:| .::|:.||.|..||.|:::::..|..::....|::...:
  Rat   285 GTSVQNMVHWTQVVKYHKLQAFDWGSSDKNYFHYNQSYPPLYSIKDMQLPTALWSGGKDWLADTS 349

  Fly   352 DIWRLLTRLPNVEAVYKVPWKRWNHFDFICGLGVREYIFDNIVLSMNRYE 401
            ||..|||.:|.:  ||......|:|.|||.||.....:::.:|..|.:|:
  Rat   350 DINILLTEIPTL--VYHKNIPEWDHLDFIWGLDAPWRLYNEVVSLMKKYQ 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6753NP_650219.2 PLN02872 39..394 CDD:215470 121/366 (33%)
LipaNP_036864.3 PLN02872 7..394 CDD:215470 122/370 (33%)

Return to query results.
Submit another query.