DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6753 and lipl-4

DIOPT Version :9

Sequence 1:NP_650219.2 Gene:CG6753 / 41557 FlyBaseID:FBgn0038070 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_504662.1 Gene:lipl-4 / 179046 WormBaseID:WBGene00019376 Length:411 Species:Caenorhabditis elegans


Alignment Length:404 Identity:123/404 - (30%)
Similarity:197/404 - (48%) Gaps:29/404 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VVLLCLALLGLQQVSRATLRQSREIIITDAVRRIQNDGYNVERHSVTTKDGYVLTLHRIP---QV 67
            |::..|.:|.|...|::.   ..|..: |....|::.||:||.::.|||||::|.|||||   :|
 Worm    11 VMIPLLIILLLSNYSKSV---DLEFYL-DTPELIKSWGYSVEIYNTTTKDGFILELHRIPYGREV 71

  Fly    68 DPELGSLLRRPVVFLLSGLYASSDVWLLNGREDSLAYLLWRAGYDVWLGNNRGNIYCRKNMWRN- 131
            .........|||:||..|...||..|:.|....|..::...||:||||||.|||.|.||::..| 
 Worm    72 PTSSDVNNSRPVIFLQHGFLCSSFDWVANSPHQSAGFVFADAGFDVWLGNFRGNTYSRKHVSLNP 136

  Fly   132 TTEREFWDFSWHEMGVYDLPAQVDYVLRTTGQKAMHFVGISQGGTVFLVLNSMMPQYNAVFKSAT 196
            ..:.:|||:||.::..|||||.:...|..:||:::::.|.|.|........|..|:::...|...
 Worm   137 DKDPKFWDWSWDQISEYDLPAMIGKALEISGQESLYYTGFSLGTLTMFAKLSTDPKFSRKIKKYF 201

  Fly   197 LLAPVAYVSNTKSGLAKVIGPVLGT--RNYVSKMLEGV-EMFSTNKFFKKFLSMTC-----LENE 253
            .|||:..:.:. .|:...:|...|.  ..||.|  .|. |:|.::..|||.:..||     ||. 
 Worm   202 ALAPIGSIKHA-HGVFLFLGRHFGKDYEEYVKK--HGSDELFGSSLLFKKIVKYTCGLFDTLEE- 262

  Fly   254 KPLVCISRLWPAVGYDTRFLNKTLLPDLMANFPAGGSVKQLMHYFQGYVSTRFRQYDYGPERNWL 318
               .|.......:|......|:|.:|..:|:.|||.|...:.|..|.:.......:|.|.|:|..
 Worm   263 ---FCSDITLLFIGTANENWNQTRIPVYLAHTPAGSSSNVMAHLDQMFSYGGVPTFDMGEEKNLK 324

  Fly   319 HYQQLEPPEYALENVS-TPVTVFFSENDYIVAPADIWRLLTRLPN---VEAVYKVPWKRWNHFDF 379
            .|.|..||:|....:: .|:.:|:|::|::....|:...|....|   |:..:::  :.:||..|
 Worm   325 AYGQKLPPQYNFTGIADVPIYLFWSDDDWLSTKQDLEETLFAQLNSQVVQGSFRI--ENYNHLHF 387

  Fly   380 ICGLGVREYIFDNI 393
            |.|......:::.|
 Worm   388 IWGTNAASQVYNVI 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6753NP_650219.2 PLN02872 39..394 CDD:215470 116/371 (31%)
lipl-4NP_504662.1 PLN02872 38..399 CDD:215470 115/369 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 220 1.000 Domainoid score I1499
eggNOG 1 0.900 - - E2759_KOG2624
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55134
OrthoDB 1 1.010 - - D408561at33208
OrthoFinder 1 1.000 - - FOG0000083
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11005
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X80
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.930

Return to query results.
Submit another query.