DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11608 and Lip2

DIOPT Version :10

Sequence 1:NP_650218.3 Gene:CG11608 / 41556 FlyBaseID:FBgn0038069 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_524667.1 Gene:Lip2 / 43980 FlyBaseID:FBgn0024740 Length:413 Species:Drosophila melanogaster


Alignment Length:388 Identity:111/388 - (28%)
Similarity:187/388 - (48%) Gaps:47/388 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 TAVDIISSHNYPVQTHTVVTRDGYILSVFRIPSSQLCASSEPKPVVLINHGMTGSADSWLLTGPR 111
            |.:|.:.:.|...:.|.|.|.|||.|.:.|:|  :|.|    |||:|: ||:.||:..|:..||.
  Fly    35 TTMDWLEAQNVSHEVHNVTTADGYQLQLQRLP--RLGA----KPVLLV-HGLLGSSLGWVCMGPE 92

  Fly   112 NGLPFLLADACYDVWLINCRG-TRYSRKHLKLKAWLLQFWRFSWHEIGMEDLPATVDHI------ 169
            ..|.|.|....|||||.|.|| :.|.|:|:.|...:::|||||:||.|..||||.:||:      
  Fly    93 RSLAFQLHHREYDVWLANLRGVSPYGRQHIDLTDVMVEFWRFSFHEHGAYDLPAIIDHMAKVTGG 157

  Fly   170 --LAS-----TKRNSLHY----VGHSQGCTSMLVMLSMRPEYNKRIRTTILLAPPVFLKHSLSMG 223
              |||     .....:|:    :||||...:.||:.::.|.:|:||:....|||...|...:...
  Fly   158 EQLASRGGPGQDEEQIHHQVVLIGHSQAFNAFLVLCAVHPRFNQRIQLIQALAPLARLHRQVRFD 222

  Fly   224 HKIMKPLFNLLP------DIELLP--HHKMLNSAVSAICKILGVKDVCTALYLLTNGRVSQHMNR 280
            ...::.|...:.      ..|:.|  :.:.:..|...:|:....:.|.:|   ..|.::.:..|.
  Fly   223 SFQVRRLMKFIKKRQKAYKFEIFPPGYFRKVCQAKRDLCEYYAKQLVGSA---QNNKKLLEAFNY 284

  Fly   281 TLIPMLIATHPAGISSRQPRHFFQLKDSGRFRQYDFGFGMNYLIYRQNTPPEYPLEMVRPHSAIH 345
            ..:..       |.|.|:.:|..|:..||.|..||||...|..:|.......|.:..:.  ..|.
  Fly   285 EYLLQ-------GGSPREIKHLQQIWKSGDFISYDFGTAENLQVYHSVEALSYNISQIT--VPII 340

  Fly   346 IFYSDDDGTISPRDVLTLASKLPYAVP--HHITDETWNHMDFLLANNINELINNPVIKIIKTF 406
            :::.:.|...:|..|..:.:::..:|.  ..|..:.:||:|||::.::..|:|:.:|:.::.|
  Fly   341 LYFGETDAIATPEGVHAIYARMLRSVKSVRRINSKKFNHLDFLISGDVKSLVNDKLIEHMEQF 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11608NP_650218.3 PLN02872 39..405 CDD:215470 110/385 (29%)
Lip2NP_524667.1 PLN02872 24..407 CDD:215470 111/388 (29%)

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