DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11608 and Lip1

DIOPT Version :10

Sequence 1:NP_650218.3 Gene:CG11608 / 41556 FlyBaseID:FBgn0038069 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_523540.1 Gene:Lip1 / 43973 FlyBaseID:FBgn0023496 Length:439 Species:Drosophila melanogaster


Alignment Length:384 Identity:135/384 - (35%)
Similarity:204/384 - (53%) Gaps:28/384 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 AVD-IISSHNYPVQTHTVVTRDGYILSVFRIPSSQLCASSEPKPVVLINHGMTGSADSWLLTGPR 111
            :|| :|:.:.|..:.|.|.|.|||||::.||       ..:..|..|:.||:..|:..:::.||.
  Fly    67 SVDKLIAKYGYESEVHHVTTEDGYILTMHRI-------RKQGAPPFLLQHGLVDSSAGFVVMGPN 124

  Fly   112 NGLPFLLADACYDVWLINCRGTRYSRKHLKLKAWLLQFWRFSWHEIGMEDLPATVDHILASTKRN 176
            ..|.:||||..|||||.|.||.||||.|..|.....:||.||||||||.||||.:||:|..|...
  Fly   125 VSLAYLLADHNYDVWLGNARGNRYSRNHTTLDPDESKFWDFSWHEIGMYDLPAMIDHVLKVTGFP 189

  Fly   177 SLHYVGHSQGCTSMLVMLSMRPEYNKRIRTTILLAPPVFLKHSLSMGHKIMKPL---FNLLPDIE 238
            .|||.||||||||..||.||||.||.::.:...|||.|:.|.  :..|..::.:   ||.|....
  Fly   190 KLHYAGHSQGCTSFFVMCSMRPAYNDKVVSMQALAPAVYAKE--TEDHPYIRAISLYFNSLVGSS 252

  Fly   239 LLPHHKMLNSAVSAICKIL-GVKDVCTALYLLTNGRVSQHMNRTLIPMLIATHPAGISSRQPRHF 302
            :   .:|.|.....:|::. ..:.:|........||.....||.:.|:::..:|||::::|.:||
  Fly   253 I---REMFNGEFRFLCRMTEETERLCIEAVFGIVGRNWNEFNRKMFPVILGHYPAGVAAKQVKHF 314

  Fly   303 FQLKDSGRFRQYDFGFGMNYLIYRQNTPPEYPLEMVRPHSAIHIFYSDDDGTISPRDVLTLASKL 367
            .|:..||||..|.:....|..:||.:.||.|.|.:|...:  .::||.:|....|:||.::...|
  Fly   315 IQIIKSGRFAPYSYSSNKNMQLYRDHLPPRYNLSLVTVPT--FVYYSTNDLLCHPKDVESMCDDL 377

  Fly   368 -----PYAVPHHITDETWNHMDFLLANNINELINNPVIKIIKTFEENIKHKIGNIKGEI 421
                 .|.||    .:.:||||||.|.::.:::...:::::....|....:....:.||
  Fly   378 GNVTGKYLVP----QKEFNHMDFLWAIDVRKMLYRRMLQVLGKVPEGSPEEANRSRREI 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11608NP_650218.3 PLN02872 39..405 CDD:215470 132/366 (36%)
Lip1NP_523540.1 PLN02872 70..412 CDD:215470 130/359 (36%)

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