DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11608 and Lip4

DIOPT Version :10

Sequence 1:NP_650218.3 Gene:CG11608 / 41556 FlyBaseID:FBgn0038069 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_001260356.1 Gene:Lip4 / 34450 FlyBaseID:FBgn0032264 Length:448 Species:Drosophila melanogaster


Alignment Length:445 Identity:156/445 - (35%)
Similarity:237/445 - (53%) Gaps:61/445 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQSFLIQMLPILLG---IFFV------WLSNSTAL-SEVNWKNHSLHRIHHRTKVITAVDIISSH 55
            :||.:::.:.:.||   :|.|      :|..|.|: |.|..:|.....|...:.:.| ..:|..:
  Fly    29 LQSGIVEGISLSLGDITLFNVNFKTPTFLGRSVAVDSNVRLENDVDPNIQEDSHLNT-YSLIKKY 92

  Fly    56 NYPVQTHTVVTRDGYILSVFRIPSSQLCASSEPKPVVLINHGMTGSADSWLLTGPRNGLPFLLAD 120
            .||.:.||:.|.|||||::.||      |.....||:|: ||:..|:.:|::.||..||.:||.|
  Fly    93 GYPAENHTLETDDGYILTLHRI------ARPGATPVLLV-HGLLDSSATWVMMGPNKGLGYLLYD 150

  Fly   121 ACYDVWLINCRGTRYSRKHLKLKAWLLQFWRFSWHEIGMEDLPATVDHILASTKRNSLHYVGHSQ 185
            ..||||:.|.||..|||||:|......:||.|::||:|..|:|||:|:||.||..:.|||:||||
  Fly   151 QGYDVWMANVRGNTYSRKHVKYSTHHAKFWDFTFHEMGKHDIPATMDYILNSTGVSQLHYIGHSQ 215

  Fly   186 GCTSMLVMLSMRPEYNKRIRTTILLAPPVFLKHSLSMGHKIMKPLFNLLPDIELLPHHKMLNSAV 250
            |.....:|.|.:|||..:|.....|||..||||..|       |:.|.|.:..|         :|
  Fly   216 GTVVFWIMASEKPEYMDKIILMQGLAPVAFLKHCRS-------PVVNFLAEWHL---------SV 264

  Fly   251 SAICKILGV------------------------KDVCTALYLLTNGRVSQHMNRTLIPMLIATHP 291
            |.:.|::||                        |::|:.:..||.|.....:|.|::|:::...|
  Fly   265 SLVLKLIGVHEFLPKNEFISMFNRIICDETTITKEICSNVIFLTTGFDKLQLNETMLPVIVGHSP 329

  Fly   292 AGISSRQPRHFFQLKDSGRFRQYDFGFGMNYLIYRQNTPPEYPLEMVRPHSAIHIFYSDDDGTIS 356
            ||.|::|.:||.||..||.|||||.|:..|:.||....||.|.||.||  :.:.::|..:|....
  Fly   330 AGASTKQMQHFGQLNRSGGFRQYDHGWLRNHWIYGTIDPPSYHLENVR--AKVALYYGQNDWLAP 392

  Fly   357 PRDVLTLASKLPYAVPHHITDE-TWNHMDFLLANNINELINNPVIKIIKTFEENI 410
            |.||..|..|||..|..::.|: .:||:||:...:..||:.:.:::|::..|.:|
  Fly   393 PEDVEMLNRKLPNVVEKYLVDDKEFNHLDFIWGIDARELLWDRMLEIMRNHENSI 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11608NP_650218.3 PLN02872 39..405 CDD:215470 142/390 (36%)
Lip4NP_001260356.1 PLN02872 88..446 CDD:215470 141/382 (37%)

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