DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11608 and Lipk

DIOPT Version :10

Sequence 1:NP_650218.3 Gene:CG11608 / 41556 FlyBaseID:FBgn0038069 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_001099844.1 Gene:Lipk / 294094 RGDID:1309724 Length:397 Species:Rattus norvegicus


Alignment Length:379 Identity:127/379 - (33%)
Similarity:200/379 - (52%) Gaps:32/379 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 DIISSHNYPVQTHTVVTRDGYILSVFRIPSSQLCA-SSEPKPVVLINHGMTGSADSWLLTGPRNG 113
            :|||...||.:.|.|||.|||||..:|||..:.|: .:.||.||.:.||:..||.:|:...|.|.
  Rat    35 EIISYWGYPYERHDVVTEDGYILGTYRIPHGKGCSRKAVPKAVVYLQHGLIASASNWICNLPNNS 99

  Fly   114 LPFLLADACYDVWLINCRGTRYSRKHLKLKAWLLQFWRFSWHEIGMEDLPATVDHILASTKRNSL 178
            |.|||||:.|||||.|.||..:|||||:|.....::|.||..|:...|||||::.||..:.:..|
  Rat   100 LAFLLADSGYDVWLGNSRGNTWSRKHLRLSPKSPEYWAFSLDEMAKYDLPATINLILEKSGQKQL 164

  Fly   179 HYVGHSQGCTSMLVMLSMRPEYNKRIRTTILLAPPVFLKHSLS-------MGHKIMKPLFNLLPD 236
            .|||||||.|...:..|..||..|:||....|||.|.:|::.|       :..|.:|.||.    
  Rat   165 FYVGHSQGTTIAFIAFSTNPELAKKIRMFFALAPVVTVKYTQSPMKKLTTLSRKAVKILFG---- 225

  Fly   237 IELLPHHKMLNSAVSA-ICKILGVKDVCTALYLLTNGRVSQHMNRTLIPMLIATHPAGISSRQPR 300
            .::...|..|...::. :|.....:.:|:......:|...|::|.:.:.:.:|..|||.|.:...
  Rat   226 DKMFSTHTWLEQFIATKVCNRKLFRQLCSNFLFSLSGFDPQNLNMSRLDVYMAQSPAGTSVQNML 290

  Fly   301 HFFQLKDSGRFRQYDFGF-GMNYLIYRQNTPPEYPLEMVRPHSAI----HIFYSDDDGTISPRDV 360
            |:.|..:||:.:.:|:|. ..|.:.:.|.|||.|.:..:|..:|:    ....:|:..|   :::
  Rat   291 HWAQAVNSGQLQAFDWGNPDQNMMHFNQLTPPVYNISKMRVPTAMWSGGRDVVADEKDT---KNL 352

  Fly   361 LTLASKLPY--AVPHHITDETWNHMDFLLANNINELINNPVIKIIKTFEENIKH 412
            |...:.|.|  .:||      :|||||.|..:..:.:...:|.::   ||::::
  Rat   353 LPKVANLIYYKEIPH------YNHMDFYLGQDAPQEVYRDLITMM---EESLQN 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11608NP_650218.3 PLN02872 39..405 CDD:215470 125/370 (34%)
LipkNP_001099844.1 PLN02872 34..388 CDD:215470 124/365 (34%)

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