DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11600 and Lipo4

DIOPT Version :10

Sequence 1:NP_650217.2 Gene:CG11600 / 41555 FlyBaseID:FBgn0038068 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001310315.1 Gene:Lipo4 / 628236 MGIID:3779637 Length:398 Species:Mus musculus


Alignment Length:368 Identity:100/368 - (27%)
Similarity:180/368 - (48%) Gaps:20/368 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 IIDKYGYSVETHTVRTGDGYILDMFRIP-SSPNCKEDGFKPSVLIQHGLISLADSFLVTGPRSGL 109
            ||..:.|..|.:.|.|.|||||.:.||| ...|......|..|..||||::...:::...|.:.|
Mouse    36 IIKHWEYPSEEYEVVTDDGYILPINRIPHGKNNANSSAPKMVVFCQHGLLATPGAWVSNLPDNSL 100

  Fly   110 PFMLADRCYDVWLSNSRGVRYSQRHIRLKASQDAFWRFSWHEMGMEDLPAMIDYILSTTNEEALH 174
            .|:|||..||||:.:|||..::::|:.|......||.||:.:|...||||.|::||..|.::.::
Mouse   101 AFILADAGYDVWMGSSRGSTWAKKHVTLNTDSKEFWDFSFDQMIKYDLPATINFILDKTGQKQIY 165

  Fly   175 FVCHSQGCTTLLVLLSMKPEYNRMIKTANMMAPAVFMKHARNKLMKMFGNIIMSMKDSSFFGPLD 239
            ::.||||....:...:...:....||...::||...::|::.  :....:.:........||..:
Mouse   166 YIGHSQGTLIAIGAFATNQKLAEKIKLNILLAPIYSVQHSKG--IARLTSYLTPTTIKVLFGEKE 228

  Fly   240 AIRFLLS-----VFCKCSKFKKLCAFMFILASEEPTSYMNNTAIPLILATHPGAISTRQPKHFLQ 299
            .:..::|     ..|..:.....||.|...........:|.:.:.:.:..:....|.:...|:.|
Mouse   229 FLPTVVSSEVGAYVCDINLVTAGCAAMIGSMGGYSPEQLNMSRLDVYVKLNLAGTSVKILIHYNQ 293

  Fly   300 LRKSGKFRPYDFGVMR-NKKLYNQDTPPDYPLENVRPQSPIHIYHSHGDDLVARKDIHILISKLD 363
            :|:||..:.||:|... |.:.|||.|||.|.:|:::  .|..::....|.|...:|:.||     
Mouse   294 IRRSGILQAYDWGSSSLNMQHYNQTTPPVYNVEDMK--VPTAMFTGLKDFLSDPEDVEIL----- 351

  Fly   364 KAVLHDVVFEK----WSHSDFLFAKLIKKVVNEPIIKVIDHFE 402
            |..:|::.:.|    :||.||::....::.|:|.|:.::..::
Mouse   352 KPKIHNLTYLKTIPDFSHFDFIWGLNAREEVSEEILTILRKYD 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11600NP_650217.2 PLN02872 46..396 CDD:215470 100/360 (28%)
Lipo4NP_001310315.1 PLN02872 34..391 CDD:215470 100/363 (28%)

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