DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11600 and Lipf

DIOPT Version :10

Sequence 1:NP_650217.2 Gene:CG11600 / 41555 FlyBaseID:FBgn0038068 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_059037.1 Gene:Lipf / 50682 RGDID:708441 Length:395 Species:Rattus norvegicus


Alignment Length:403 Identity:124/403 - (30%)
Similarity:200/403 - (49%) Gaps:35/403 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 WLLIVSGMPKVKFGLQNFTGR----GKDYRIKVITGILIIDKYGYSVETHTVRTGDGYILDMFRI 72
            |||:::.:.....|.....|:    ..:..:.:..   :|..:||..:.:.|.|.|||||.::||
  Rat     2 WLLLITSVISTFGGAHGLFGKLGPGNPEANMNISQ---MITYWGYPCQEYEVVTEDGYILGVYRI 63

  Fly    73 PSSPNCKED-GFKPSVLIQHGLISLADSFLVTGPRSGLPFMLADRCYDVWLSNSRGVRYSQRHIR 136
            |...|..|: |.:|.|.:|||||:.|.:::...|.:.|.|||||..|||||.||||..:|::::.
  Rat    64 PHGKNNSENIGKRPVVYLQHGLIASATNWIANLPNNSLAFMLADAGYDVWLGNSRGNTWSRKNVY 128

  Fly   137 LKASQDAFWRFSWHEMGMEDLPAMIDYILSTTNEEALHFVCHSQGCTTLLVLLSMKPEYNRMIKT 201
            .......||.||:.||...||||.|::|:..|.:|.:|:|.||||.|...:..|..|...:.|||
  Rat   129 YSPDSVEFWAFSFDEMAKYDLPATINFIVQKTGQEKIHYVGHSQGTTIGFIAFSTNPTLAKKIKT 193

  Fly   202 ANMMAPAVFMKHARNKLMK-----------MFGN--IIMSMKDSSFFGPLDAIRFLLSVFCKCSK 253
            ...:||...:|:.::.|.|           |||.  .:.......|.|.....|.:|.:.|..:.
  Rat   194 FYALAPVATVKYTQSPLKKISFIPTFLFKLMFGKKMFLPHTYFDDFLGTEVCSREVLDLLCSNTL 258

  Fly   254 FKKLCAFMFILASEEPTSYMNNTAIPLILATHPGAISTRQPKHFLQLRKSGKFRPYDFG-VMRNK 317
            | ..|.|        ....:|.:...:.|..:|...|.:...|:.||.:||||:.:::| ..:|.
  Rat   259 F-IFCGF--------DKKNLNVSRFDVYLGHNPAGTSVQDFLHWAQLVRSGKFQAFNWGSPSQNM 314

  Fly   318 KLYNQDTPPDYPLENVRPQSPIHIYHSHGDDLVARKDIHILISKLDKAVLHDVVFEKWSHSDFLF 382
            ..|||.|||:|.:..:  ..|:.:::...|.|...:|:.:|:.||...:.|..:. .::|.||::
  Rat   315 LHYNQKTPPEYDVSAM--TVPVAVWNGGNDILADPQDVAMLLPKLSNLLFHKEIL-AYNHLDFIW 376

  Fly   383 A-KLIKKVVNEPI 394
            | ...::|.||.|
  Rat   377 AMDAPQEVYNEMI 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11600NP_650217.2 PLN02872 46..396 CDD:215470 119/365 (33%)
LipfNP_059037.1 PLN02872 4..389 CDD:215470 121/399 (30%)

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