DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11600 and CG31872

DIOPT Version :10

Sequence 1:NP_650217.2 Gene:CG11600 / 41555 FlyBaseID:FBgn0038068 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_723603.1 Gene:CG31872 / 34458 FlyBaseID:FBgn0051872 Length:1073 Species:Drosophila melanogaster


Alignment Length:364 Identity:122/364 - (33%)
Similarity:188/364 - (51%) Gaps:29/364 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 IIDKYGYSVETHTVRTGDGYILDMFRIPSSPNCKEDGFKPSVLIQHGLISLADSFLVTGPRSGLP 110
            :|.|||:..|||...|.|||.|.:.|||.|      |..| ||:.|||::.:|:::..||..||.
  Fly   719 MISKYGHQAETHYAFTADGYKLCLHRIPRS------GATP-VLLVHGLMASSDTWVQFGPSQGLA 776

  Fly   111 FMLADRCYDVWLSNSRGVRYSQRHIRLKASQDAFWRFSWHEMGMEDLPAMIDYILSTTNEEALHF 175
            ::|:...||||:.|:||..||:..:..:.|...||.||:||:|..||||.||.||..|...::.:
  Fly   777 YILSQSGYDVWMLNTRGNVYSEERLAGRESDKIFWDFSFHEIGQYDLPAAIDLILLQTKMPSIQY 841

  Fly   176 VCHSQGCTTLLVLLSMKPEYNRMIKTANMMAPAVFMKHARN---KLMK-------MFGNIIMSMK 230
            :.||||.|...|:.|.:|||...|.....::|:|:|:..|:   |.||       |..|::...|
  Fly   842 IGHSQGSTAFFVMCSERPEYAGKISLMQSLSPSVYMEGTRSPALKFMKVLQGGFTMLLNLLGGHK 906

  Fly   231 DSSFFGPLDAIRFLLSVFCKCSKF--KKLCA-FMFILASEEPTSYMNNTAIPLILATHPGAISTR 292
            .|.....:|..|..:     |:|.  .::|| |.|::......|: |.|..|::........|.:
  Fly   907 ISLKNRIVDMFRNHI-----CNKLIPSRICAIFEFVVCGFNFNSF-NMTLSPILEGHASQGSSAK 965

  Fly   293 QPKHFLQLRKSGKFRPYDFGVMRNKKLYNQDTPPDYPLENVRPQSPIHIYHSHGDDLVARKDIHI 357
            |..||.||:.:..|:.||:|::.||..|....||.|.|.....:..:|  ...||.|.:..|:..
  Fly   966 QIYHFAQLQGNSAFQKYDYGLILNKIRYQSIFPPLYNLSLALGKVALH--RGDGDWLGSESDVLR 1028

  Fly   358 LISKLDKAVLH-DVVFEKWSHSDFLFAKLIKKVVNEPII 395
            |...|...:.: ::.||.:||.||..:|.::.:|.:.:|
  Fly  1029 LERDLPNCIENRNIRFEGFSHFDFTISKDVRSLVYDRVI 1067

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11600NP_650217.2 PLN02872 46..396 CDD:215470 122/364 (34%)
CG31872NP_723603.1 Smc <220..>485 CDD:440809
PLN02872 718..1067 CDD:215470 121/362 (33%)
Blue background indicates that the domain is not in the aligned region.

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