DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11600 and Lipo1

DIOPT Version :10

Sequence 1:NP_650217.2 Gene:CG11600 / 41555 FlyBaseID:FBgn0038068 Length:406 Species:Drosophila melanogaster
Sequence 2:NP_001309994.1 Gene:Lipo1 / 329055 MGIID:3647308 Length:399 Species:Mus musculus


Alignment Length:366 Identity:109/366 - (29%)
Similarity:177/366 - (48%) Gaps:16/366 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 IIDKYGYSVETHTVRTGDGYILDMFRIP-SSPNCKEDGFKPSVLIQHGLISLADSFLVTGPRSGL 109
            ||..:.|..|.:.|.|.|||||.:.||| ...|......|..|....||.|.|..::...|.:.|
Mouse    36 IIKHWEYPSEEYEVVTDDGYILPINRIPHGKNNANSSAPKMVVFCLPGLFSTAGVWVSNPPDNSL 100

  Fly   110 PFMLADRCYDVWLSNSRGVRYSQRHIRLKASQDAFWRFSWHEMGMEDLPAMIDYILSTTNEEALH 174
            .|:|||..|||||.|:||..::::|:.|......||.||:.||...||||:|::||..|.::.::
Mouse   101 AFILADAGYDVWLGNNRGSTWAKKHVTLNPDSKEFWAFSYDEMIKYDLPAIINFILEKTGQKQIY 165

  Fly   175 FVCHSQGCTTLLVLLSMKPEYNRMIKTANMMAPAVFMKHAR--NKLMKMFG----NIIMSMKDSS 233
            :..||||....|...:...|....||.:.::||...:|:.:  .:|...|.    .|:...|:  
Mouse   166 YAGHSQGTLIALGAFATNQELAEKIKLSILIAPIHTVKYVKGSGRLPAYFTPTAFKIVFGEKE-- 228

  Fly   234 FFGPLDAIRFLLSVFCKCSKFKKLCAFMFILASEEPTSYMNNTAIPLILATHPGAISTRQPK-HF 297
             |.|......|....|........||.:....:......:|.:.:.:.: ||..|.|:.|.. |:
Mouse   229 -FFPTKVFSRLSQHVCDIKLVDAGCATVLGSLTGYSPEQLNTSRVDVYI-THSLAESSVQILIHY 291

  Fly   298 LQLRKSGKFRPYDFG-VMRNKKLYNQDTPPDYPLENVRPQSPIHIYHSHGDDLVARKDIHILISK 361
            .|..:||.|:.||:| ...|.:.|||.|||.|.:|:::  .|..::....|.|...:|:..|:.|
Mouse   292 GQAIRSGVFQAYDWGSPSLNMQHYNQTTPPVYNVEDMK--VPTAMFSGLKDFLSNPEDVANLVPK 354

  Fly   362 LDKAVLHDVVFEKWSHSDFLFAKLIKKVVNEPIIKVIDHFE 402
            :.....|.::.: :||.||:.....::.|:|.|:.::..::
Mouse   355 ISNLTYHKIISD-FSHLDFITGLNAREEVSEEILTILRKYD 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11600NP_650217.2 PLN02872 46..396 CDD:215470 109/358 (30%)
Lipo1NP_001309994.1 PLN02872 34..391 CDD:215470 109/361 (30%)

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