DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11598 and Lipf

DIOPT Version :10

Sequence 1:NP_001036710.1 Gene:CG11598 / 41554 FlyBaseID:FBgn0038067 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_059037.1 Gene:Lipf / 50682 RGDID:708441 Length:395 Species:Rattus norvegicus


Alignment Length:362 Identity:118/362 - (32%)
Similarity:190/362 - (52%) Gaps:13/362 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 SEIIASHNYPVEVHTVLTRDGYLLDAFRIP-GSKFCQQSGPKPAVLFQHGMSASSDVFLLNGPQD 85
            |::|....||.:.:.|:|.|||:|..:||| |....:..|.:|.|..|||:.||:..::.|.|.:
  Rat    35 SQMITYWGYPCQEYEVVTEDGYILGVYRIPHGKNNSENIGKRPVVYLQHGLIASATNWIANLPNN 99

  Fly    86 SLAFMLADACFDVWLSNSRGTRYSRRHVSLDPSDEAFWRFSWHEIGTEDVAAFIDYILDTTKQRA 150
            |||||||||.:||||.||||..:||::|...|....||.||:.|:...|:.|.|::|:..|.|..
  Rat   100 SLAFMLADAGYDVWLGNSRGNTWSRKNVYYSPDSVEFWAFSFDEMAKYDLPATINFIVQKTGQEK 164

  Fly   151 LHFLGHSQGCTTLVVLLSMRPEYNKLVKTAVLLAPAVFMRHTSTLSQTVFRSFI------MAMPD 209
            :|::|||||.|...:..|..|...|.:||...|||...:::|.:..:.:  |||      :....
  Rat   165 IHYVGHSQGTTIGFIAFSTNPTLAKKIKTFYALAPVATVKYTQSPLKKI--SFIPTFLFKLMFGK 227

  Fly   210 KEFMYHNGVLNKLLSNVCGLFVARVFCTTFFLISNGKISKHLNTSVIPLIAATLPAGVSSRQPKH 274
            |.|:.|....:.|.:.||...|..:.|:....|..|...|:||.|...:.....|||.|.:...|
  Rat   228 KMFLPHTYFDDFLGTEVCSREVLDLLCSNTLFIFCGFDKKNLNVSRFDVYLGHNPAGTSVQDFLH 292

  Fly   275 FIQLTDSGKFRPFDFGI-LRNLINYKSLEPPDYTLSNVRPLTPVHIFYSDDDSSTAKEDIQNFAA 338
            :.||..||||:.|::|. .:|:::|....||:|.:|.:  ..||.::...:|.....:|:.....
  Rat   293 WAQLVRSGKFQAFNWGSPSQNMLHYNQKTPPEYDVSAM--TVPVAVWNGGNDILADPQDVAMLLP 355

  Fly   339 RVPEVVMHRISTPGWHHTDFVHSMTVADVINKPVIEI 375
            ::..::.|: ....::|.||:.:|.....:...:|.:
  Rat   356 KLSNLLFHK-EILAYNHLDFIWAMDAPQEVYNEMISM 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11598NP_001036710.1 PLN02872 22..384 CDD:215470 118/362 (33%)
LipfNP_059037.1 PLN02872 4..389 CDD:215470 117/358 (33%)

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