DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11598 and Lipa

DIOPT Version :10

Sequence 1:NP_001036710.1 Gene:CG11598 / 41554 FlyBaseID:FBgn0038067 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_036864.3 Gene:Lipa / 25055 RGDID:3008 Length:397 Species:Rattus norvegicus


Alignment Length:379 Identity:122/379 - (32%)
Similarity:190/379 - (50%) Gaps:19/379 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 IDLAKGLITSEIIASHNYPVEVHTVLTRDGYLLDAFRIP-GSKFCQQSGPKPAVLFQHGMSASSD 76
            :|....:..:|||....||.|.|:|.|.|||:|...||| |.|.....||||.|..|||..|.|.
  Rat    27 VDPEANMNVTEIIMHWGYPGEEHSVQTGDGYILGVHRIPHGRKNQFDKGPKPVVYLQHGFLADSS 91

  Fly    77 VFLLNGPQDSLAFMLADACFDVWLSNSRGTRYSRRHVSLDPSDEAFWRFSWHEIGTEDVAAFIDY 141
            .::.|...:||.|:||||.||||:.||||..:||:|.:|..|.:.:|.||:.|:...|:.|.|:|
  Rat    92 NWVTNIDNNSLGFILADAGFDVWMGNSRGNTWSRKHKTLSVSQDEYWAFSFDEMAKYDLPASINY 156

  Fly   142 ILDTTKQRALHFLGHSQGCTTLVVLLSMRPEYNKLVKTAVLLAPAVFMRHTSTLSQTVFRSFIMA 206
            ||:.|.|..|:::|||||||...:..|..||..|.||....|||.:.:...|.....:.|     
  Rat   157 ILNKTGQEQLYYVGHSQGCTIGFIAFSQMPELAKKVKMFFALAPVLSLNFASGPMVKLGR----- 216

  Fly   207 MPD---------KEFMYHNGVLNKLLSNVCGLFVARVFCTTFFLISNGKISKHLNTSVIPLIAAT 262
            :||         |:|:..:.::..|.:::|...:.:..|...|.:..|...|:||.|.:.:....
  Rat   217 LPDLLLEDLFGQKQFLPQSAMVKWLSTHICTHVIMKELCANIFFLICGFNEKNLNMSRVDVYTTH 281

  Fly   263 LPAGVSSRQPKHFIQLTDSGKFRPFDFGIL-RNLINYKSLEPPDYTLSNVRPLTPVHIFYSDDDS 326
            .|||.|.:...|:.|:....|.:.||:|.. :|..:|....||.|::.:::  .|..::....|.
  Rat   282 CPAGTSVQNMVHWTQVVKYHKLQAFDWGSSDKNYFHYNQSYPPLYSIKDMQ--LPTALWSGGKDW 344

  Fly   327 STAKEDIQNFAARVPEVVMHRISTPGWHHTDFVHSMTVADVINKPVIEIFRSFE 380
            .....||......:|.:|.|: :.|.|.|.||:..:.....:...|:.:.:.::
  Rat   345 LADTSDINILLTEIPTLVYHK-NIPEWDHLDFIWGLDAPWRLYNEVVSLMKKYQ 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11598NP_001036710.1 PLN02872 22..384 CDD:215470 121/370 (33%)
LipaNP_036864.3 PLN02872 7..394 CDD:215470 122/374 (33%)

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