DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11598 and lipl-5

DIOPT Version :10

Sequence 1:NP_001036710.1 Gene:CG11598 / 41554 FlyBaseID:FBgn0038067 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_503184.1 Gene:lipl-5 / 178563 WormBaseID:WBGene00022642 Length:403 Species:Caenorhabditis elegans


Alignment Length:371 Identity:116/371 - (31%)
Similarity:187/371 - (50%) Gaps:16/371 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LITSEIIASHNYPVEVHTVLTRDGYLLDAFRIPGSK--FCQQSGPKPAVLFQHGMSASSDVFLLN 81
            :.|.:||....||..::||.|.|||:|:..|||..|  ....:|.:|.|..|||:..:|..:::|
 Worm    27 MTTPQIIERWGYPAMIYTVATDDGYILEMHRIPFGKTNVTWPNGKRPVVFMQHGLLCASSDWVVN 91

  Fly    82 GPQDSLAFMLADACFDVWLSNSRGTRYSRRHVSLDPSDEAFWRFSWHEIGTEDVAAFIDYILDTT 146
            .|..|..|:.|||.|||||.|.||..||.:|..|.||..|||.:||.|:.|.|:.|.|:::|:.|
 Worm    92 LPDQSAGFLFADAGFDVWLGNMRGNTYSMKHKDLKPSHSAFWDWSWDEMATYDLNAMINHVLEVT 156

  Fly   147 KQRALHFLGHSQGCTTLVVLLSMRP-EYNKLVKTAVLLAPAVFMRHTSTLSQTVFRSFIMAMPD- 209
            .|.:::::|||||..|:...||... .:.|.:|....|||...::|.... .:.|.::.....| 
 Worm   157 GQDSVYYMGHSQGTLTMFSHLSKDDGSFAKKIKKFFALAPIGSVKHIKGF-LSFFANYFSLEFDG 220

  Fly   210 -------KEFMYHNGVLNKLLSNVC-GLFVARVFCTTFFLISNGKISKHLNTSVIPLIAATLPAG 266
                   .||:.:|..:.....::| ||.|....|.....:..|..|...|.:.:|:.|...|||
 Worm   221 WFDIFGAGEFLPNNWAMKLAAKDICGGLKVEADLCDNVLFLIAGPESDQWNQTRVPVYATHDPAG 285

  Fly   267 VSSRQPKHFIQLTDSGKFRPFDFGILRNLINYKSLEPPDYTLSNVRPLTPVHIFYSDDDSSTAKE 331
            .|::...|::|:...|....:|:|...|...|....||:|..:.::. |.:::::||.|......
 Worm   286 TSTQNIVHWMQMVHHGGVPAYDWGTKTNKKKYGQANPPEYDFTAIKG-TKIYLYWSDADWLADTP 349

  Fly   332 DIQNF-AARV-PEVVMHRISTPGWHHTDFVHSMTVADVINKPVIEI 375
            |:.:: ..|: |.:|......|.::|.||...:...|.|.:|.|::
 Worm   350 DVPDYLLTRLNPAIVAQNNHLPDYNHLDFTWGLRAPDDIYRPAIKL 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11598NP_001036710.1 PLN02872 22..384 CDD:215470 115/368 (31%)
lipl-5NP_503184.1 PLN02872 8..394 CDD:215470 115/368 (31%)

Return to query results.
Submit another query.