DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx3 and ATG20

DIOPT Version :10

Sequence 1:NP_650214.1 Gene:Snx3 / 41551 FlyBaseID:FBgn0038065 Length:167 Species:Drosophila melanogaster
Sequence 2:NP_010170.1 Gene:ATG20 / 851445 SGDID:S000002271 Length:640 Species:Saccharomyces cerevisiae


Alignment Length:122 Identity:34/122 - (27%)
Similarity:50/122 - (40%) Gaps:32/122 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 VFKVKESSVRRRYSDFEWLRNELER-DSKIVVPPLP-------------GKAWKRQMPFRGDEGI 114
            |.:.:.|:|:|||||||.||:.|.| ....::||:|             |.:.|..:|..|...:
Yeast   181 VIQFENSTVQRRYSDFESLRSILIRLFPMTLIPPIPEKQSIKNYGKSITGSSSKYLLPSEGSGSV 245

  Fly   115 -------------FDESFIEERRKGLEAFINKIAGHPLAQNERCLHMFLQENVIDKN 158
                         .||..|..|.:.|..|:||     |..||......:..:.:|.|
Yeast   246 DLSLSVIHASVNNSDEKLIRHRIRMLTEFLNK-----LLTNEEITKTSIITDFLDPN 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx3NP_650214.1 PX_SNX3_like 32..155 CDD:132804 32/117 (27%)
ATG20NP_010170.1 COG5391 7..640 CDD:227680 34/122 (28%)

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