DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx3 and Snx1

DIOPT Version :10

Sequence 1:NP_650214.1 Gene:Snx3 / 41551 FlyBaseID:FBgn0038065 Length:167 Species:Drosophila melanogaster
Sequence 2:XP_063122306.1 Gene:Snx1 / 84471 RGDID:68935 Length:538 Species:Rattus norvegicus


Alignment Length:129 Identity:38/129 - (29%)
Similarity:69/129 - (53%) Gaps:5/129 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LEIDVVNPLTTMAAGKKRYTDYEVRMRTNLPVFKVKESSVRRRYSDFEWLRNEL-ERDSK--IVV 94
            |.:.:.:| ..:..|...|..|:|..:|:||:|:.::.:|:||:|||..|..:| |:.|:  .:|
  Rat   145 LTVGITDP-EKIGDGMNAYVAYKVTTQTSLPMFRSRQFAVKRRFSDFLGLYEKLSEKHSQNGFIV 208

  Fly    95 PPLPGKAWKRQMPFR-GDEGIFDESFIEERRKGLEAFINKIAGHPLAQNERCLHMFLQENVIDK 157
            ||.|.|:.......: |.|......|:|:||..||.::.:|..||....:..:..||::..:.:
  Rat   209 PPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFLEKEELPR 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx3NP_650214.1 PX_SNX3_like 32..155 CDD:132804 38/125 (30%)
Snx1XP_063122306.1 None

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