DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx3 and snx2

DIOPT Version :10

Sequence 1:NP_650214.1 Gene:Snx3 / 41551 FlyBaseID:FBgn0038065 Length:167 Species:Drosophila melanogaster
Sequence 2:NP_001032787.1 Gene:snx2 / 568737 ZFINID:ZDB-GENE-051120-45 Length:506 Species:Danio rerio


Alignment Length:145 Identity:42/145 - (28%)
Similarity:69/145 - (47%) Gaps:18/145 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KQTLDDAYAVPANFLEIDVVNPLTTMAAGKKRYTDYEVRMRTNLPVFKVKESSVRRRYSDFEWLR 83
            :.|||         ::|.|.:| ..:..|...|..|:|..::.|.||...|..||||:|||..|.
Zfish   124 RDTLD---------IQISVSDP-EKVGDGMNAYMVYKVTTKSCLSVFSRSEVCVRRRFSDFLGLH 178

  Fly    84 NELERDSK-----IVVPPLPGKAWKRQMPFR-GDEGIFDESFIEERRKGLEAFINKIAGHPLAQN 142
            ::|.  ||     ::|||.|.|:.......: |.|.:....|:|:||..||.::.:...||....
Zfish   179 SKLA--SKYLHVGLIVPPAPEKSIVGMTKVKVGKEDLSSVEFVEKRRSALERYLMRTVKHPALLK 241

  Fly   143 ERCLHMFLQENVIDK 157
            :..:..||:.:.:.:
Zfish   242 DPDVLQFLESSELPR 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx3NP_650214.1 PX_SNX3_like 32..155 CDD:132804 39/128 (30%)
snx2NP_001032787.1 Sorting_nexin 3..68 CDD:461016
PX_SNX2 129..252 CDD:132815 39/125 (31%)
BAR_SNX2 270..503 CDD:153348
Blue background indicates that the domain is not in the aligned region.

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