DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snx3 and snx10

DIOPT Version :10

Sequence 1:NP_650214.1 Gene:Snx3 / 41551 FlyBaseID:FBgn0038065 Length:167 Species:Drosophila melanogaster
Sequence 2:XP_012820034.1 Gene:snx10 / 496527 XenbaseID:XB-GENE-942343 Length:205 Species:Xenopus tropicalis


Alignment Length:102 Identity:36/102 - (35%)
Similarity:59/102 - (57%) Gaps:9/102 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 YTDYEVRMRTNLPVFKVKESSVRRRYSDFEWLRNELERDSKIV-VPPLPGKAWKRQMPFRGDEGI 114
            |.|||:.:.||...|.:|.|.||||:.:|.|||.:|:.::.:. :|.||.:     :||   ..|
 Frog    28 YVDYEICVHTNSMCFTLKTSCVRRRFREFVWLRQKLQSNAVLTQLPELPPR-----IPF---FKI 84

  Fly   115 FDESFIEERRKGLEAFINKIAGHPLAQNERCLHMFLQ 151
            .:...:|.|.:||:.|:||:....:..::..||:|||
 Frog    85 SNSQNLEHRVRGLQEFLNKVLHCSVLLSDSRLHLFLQ 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx3NP_650214.1 PX_SNX3_like 32..155 CDD:132804 36/102 (35%)
snx10XP_012820034.1 PX_SNX10 12..123 CDD:132808 36/102 (35%)

Return to query results.
Submit another query.