DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx3 and Snx11

DIOPT Version :10

Sequence 1:NP_650214.1 Gene:Snx3 / 41551 FlyBaseID:FBgn0038065 Length:167 Species:Drosophila melanogaster
Sequence 2:NP_001012012.2 Gene:Snx11 / 303493 RGDID:1307319 Length:270 Species:Rattus norvegicus


Alignment Length:139 Identity:46/139 - (33%)
Similarity:74/139 - (53%) Gaps:17/139 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VKKQTLDDAYAVPANFLEIDVVNPLTTMAAGKKRYTDYEVRMRTNLPVFKVKESSVRRRYSDFEW 81
            ::.|.|::.       :.:.|.:|..........|.||::.:.||...|..|.|.|||||.:|.|
  Rat     8 LENQELEEV-------ITVRVQDPRLQNEGSWNSYVDYKIFLHTNSKAFTAKTSCVRRRYREFVW 65

  Fly    82 LRNELERDSKIV-VPPLPGKAWKRQMPFRGDEGIFDESFIEERRKGLEAFINKIAGHPLAQNERC 145
            ||.:|:|::.:| ||.||||:     .|.|.    .:.|||:||:||:.|:.|:....:..::..
  Rat    66 LRKQLQRNAGLVPVPELPGKS-----TFFGS----SDEFIEKRRQGLQHFLEKVLQSVVLLSDSQ 121

  Fly   146 LHMFLQENV 154
            ||:|||..:
  Rat   122 LHLFLQSQL 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx3NP_650214.1 PX_SNX3_like 32..155 CDD:132804 44/124 (35%)
Snx11NP_001012012.2 PX_SNX10 18..129 CDD:132808 44/119 (37%)

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