DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx3 and Snx30

DIOPT Version :10

Sequence 1:NP_650214.1 Gene:Snx3 / 41551 FlyBaseID:FBgn0038065 Length:167 Species:Drosophila melanogaster
Sequence 2:XP_063143392.1 Gene:Snx30 / 298033 RGDID:1311367 Length:492 Species:Rattus norvegicus


Alignment Length:161 Identity:51/161 - (31%)
Similarity:78/161 - (48%) Gaps:22/161 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMVESDGT-------ADATRRLNVKKQTLDDAYAVPANFLEIDVVNP---LTTMAAGKKRYTDYE 55
            :::.:.||       |.::..||  :..|||........|.:.|.:|   :.||    :.|..|.
  Rat    90 LILPNGGTPAGTSSPASSSSLLN--RLQLDDDIDGETRDLFVTVDDPKKHVCTM----ETYITYR 148

  Fly    56 VRMRTNLPVFKVKESSVRRRYSDFEWLRNELERDSKI-VVPPLPGKAWKRQMPFRGDEGIFDESF 119
            :..::....|.:.|.||||||.||:||||:||..... ::||||.|     ...:|....|.|.|
  Rat   149 ITTKSTRVEFDLPEYSVRRRYQDFDWLRNKLEESQPTHLIPPLPEK-----FVVKGVVDRFSEEF 208

  Fly   120 IEERRKGLEAFINKIAGHPLAQNERCLHMFL 150
            :|.|||.|:.|:.:|..||:.......::||
  Rat   209 VETRRKALDKFLKRITDHPVLSFNEHFNVFL 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx3NP_650214.1 PX_SNX3_like 32..155 CDD:132804 43/123 (35%)
Snx30XP_063143392.1 None

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