DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snx3 and Snx2

DIOPT Version :10

Sequence 1:NP_650214.1 Gene:Snx3 / 41551 FlyBaseID:FBgn0038065 Length:167 Species:Drosophila melanogaster
Sequence 2:NP_001099605.2 Gene:Snx2 / 291464 RGDID:1310291 Length:519 Species:Rattus norvegicus


Alignment Length:131 Identity:41/131 - (31%)
Similarity:64/131 - (48%) Gaps:9/131 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LEIDVVNPLTTMAAGKKRYTDYEVRMRTNLPVFKVKESSVRRRYSDFEWLRNELERDSK-----I 92
            :||.|.:| ..:..|...|..|.|..:|:|.:|...|.||:||:|||..|.::|.  ||     .
  Rat   142 IEIGVSDP-EKVGDGMNAYMAYRVTTKTSLSMFSKSEFSVKRRFSDFLGLHSKLA--SKYLHVGY 203

  Fly    93 VVPPLPGKAWKRQMPFR-GDEGIFDESFIEERRKGLEAFINKIAGHPLAQNERCLHMFLQENVID 156
            :|||.|.|:.......: |.|......|:|:||..||.::.:...||....:..|..||:.:.:.
  Rat   204 IVPPAPEKSIVGMTKVKVGKEDSSSTEFVEKRRAALERYLQRTVKHPTLLQDPDLRQFLESSELP 268

  Fly   157 K 157
            :
  Rat   269 R 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx3NP_650214.1 PX_SNX3_like 32..155 CDD:132804 41/127 (32%)
Snx2NP_001099605.2 Sorting_nexin 3..75 CDD:461016
PX_SNX2 142..265 CDD:132815 41/125 (33%)
BAR 283..516 CDD:472257
Blue background indicates that the domain is not in the aligned region.

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