DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snx3 and Snx30

DIOPT Version :10

Sequence 1:NP_650214.1 Gene:Snx3 / 41551 FlyBaseID:FBgn0038065 Length:167 Species:Drosophila melanogaster
Sequence 2:NP_766056.1 Gene:Snx30 / 209131 MGIID:2443882 Length:437 Species:Mus musculus


Alignment Length:149 Identity:51/149 - (34%)
Similarity:74/149 - (49%) Gaps:14/149 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GTAD-ATRRLNVKKQTLDDAYAVPANFLEIDVVNP---LTTMAAGKKRYTDYEVRMRTNLPVFKV 67
            |||. |:....:.:..|||.....|..|.:.|.:|   :.||    :.|..|.:..::....|.:
Mouse    64 GTASPASSSSLLNRLQLDDDIDGEARDLFVTVDDPKKHVCTM----ETYITYRITTKSTRVEFDL 124

  Fly    68 KESSVRRRYSDFEWLRNELERDSKI-VVPPLPGKAWKRQMPFRGDEGIFDESFIEERRKGLEAFI 131
            .|.||||||.||:||||:||..... ::||||.|     ...:|....|.|.|:|.|||.|:.|:
Mouse   125 PEYSVRRRYQDFDWLRNKLEESQPTHLIPPLPEK-----FVVKGVVDRFSEEFVETRRKALDKFL 184

  Fly   132 NKIAGHPLAQNERCLHMFL 150
            .:|..||:.......::||
Mouse   185 KRITDHPVLSFNEHFNVFL 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snx3NP_650214.1 PX_SNX3_like 32..155 CDD:132804 43/123 (35%)
Snx30NP_766056.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..45
PX_SNX7_30_like 91..206 CDD:132770 43/122 (35%)
BAR_SNX30 190..429 CDD:153351 4/14 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.