Protein Alignment Vha55 and ATPsynbeta

DIOPT Version :9

• Sequence 1: NP_001163597.1
• Gene: Vha55 / 41550
• FlyBaseID: FBgn0005671
• Length: 490
• Species: Drosophila melanogaster
• Sequence 2: NP_001259081.1
• Gene: ATPsynbeta / 43829
• FlyBaseID: FBgn0010217
• Length: 511
• Species: Drosophila melanogaster
• Alignment Length: 502
• Identity: 124/502 - (24%)
• Similarity: 208/502 - (41%)
• Gaps: 100/502 - (19%)

  Fly    27 KTVSGVNGPLV-----ILDEVKF-----------------PKFAEIVQLRLADGTVRSGQVLEVS 69
            |..:..||.:|     ::| |:|                 |:....|...|.:.|||:   :.:.
  Fly    37 KAAAAANGKIVAVIGAVVD-VQFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRT---IAMD 97

  Fly    70 GSKAVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDFLDIQG 134
            |::.:|:   |...:|        ||..:|.||..:.|||:.|..|:|||:..||..:....|..
  Fly    98 GTEGLVR---GQKVLD--------TGYPIRIPVGAETLGRIINVIGEPIDERGPIDTDKTAAIHA 151

  Fly   135 QPINPWSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKLPGKSV 199
            :..........:|::.|||..:|::...|:|.||.:|..||:                   ||:|
  Fly   152 EAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGV-------------------GKTV 197

  Fly   200 L-DDHTDNFA------IVFAAMGVNMETARFFKQDFEENG------SMENVCLFLNLANDPTIER 251
            | .:..:|.|      .|||.:|...........:..|.|      ....|.|.....|:|...|
  Fly   198 LIMELINNVAKAHGGYSVFAGVGERTREGNDLYNEMIEGGVISLKDKTSKVALVYGQMNEPPGAR 262

  Fly   252 IITPRLALTAAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYE 316
            .......||.||:...|..:.||:.:.::..:.:|..||||....:|...|:...:.||:.::.|
  Fly   263 ARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQE 327

  Fly   317 RAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRL 381
            |.  ...:.||||.:..:.:|.||:|.|.|..|....:....:.|.:....|||.|:.|.|.||:
  Fly   328 RI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRI 390

  Fly   382 M-KSAIGEGMTRKDHSDVSNQLYACYAIGKDVQAMKAVVGEEALTPDDLLYLEFLTKFEKNFISQ 445
            | .:.||:     :|.:|:..:.......|.:|.:.|::|.:.|:.:|.|.:....|.:: |:||
  Fly   391 MDPNIIGQ-----EHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQR-FLSQ 449

  Fly   446 GNYENRTVFESLDIGWQLLRIFPKEMLKRIP--------ASILAEFY 484
                          .:|:..:|.....|.:|        ::|||..|
  Fly   450 --------------PFQVAEVFTGHAGKLVPLEQTIKGFSAILAGDY 482

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha55	NP_001163597.1	V-ATPase_V1_B	25..488	CDD:273410	124/502 (25%)
ATPsynbeta	NP_001259081.1	PRK09280	44..507	CDD:236447	122/495 (25%)
		ATP-synt_ab_N	46..112	CDD:280947	14/80 (18%)
		F1-ATPase_beta	114..393	CDD:238553	82/299 (27%)
		ATP-synt_ab_C	401..508	CDD:278722	20/97 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45454778
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840