Protein Alignment Vha55 and ATPsynbetaL

DIOPT Version :9

• Sequence 1: NP_001163597.1
• Gene: Vha55 / 41550
• FlyBaseID: FBgn0005671
• Length: 490
• Species: Drosophila melanogaster
• Sequence 2: NP_648836.2
• Gene: ATPsynbetaL / 39761
• FlyBaseID: FBgn0036568
• Length: 622
• Species: Drosophila melanogaster
• Alignment Length: 479
• Identity: 121/479 - (25%)
• Similarity: 207/479 - (43%)
• Gaps: 68/479 - (14%)

  Fly    29 VSGVNGPLV-ILDEVKFPKFAEIVQLRLADGTVRSGQVLEV---SGSKAVVQV-FEGTSGIDAKN 88
            :..|.||:: :..|.:.|:....:|::  |..: :..||||   .|:..|..| .:.|.|:....
  Fly   106 IHAVIGPVIDVYFEEEVPEVLNALQVQ--DAPI-ANLVLEVFHHLGNNIVRCVAMDSTEGLRRGQ 167

  Fly    89 TLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAE--DFLDIQGQPINPWSRIYPEEMIQT 151
            .:.: ||..:|..|.:.:|||:.|..|.|||....:.::  .|:..:...:...| :.||.:: |
  Fly   168 PVLD-TGYPIRVAVGKAVLGRILNVVGDPIDDRGEVKSDFYSFIHNEAPELTDLS-VKPEILV-T 229

  Fly   152 GISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKLPGKSVL-DDHTDNFA------I 209
            ||..||::....:|.||.:|..||:                   ||:|| .:..:|.|      .
  Fly   230 GIKVIDLLAPYVKGGKIGLFGGAGV-------------------GKTVLIMELINNIAKSHGGYS 275

  Fly   210 VFAAMGVNMETARFFKQDFEENG--SMEN----VCLFLNLANDPTIERIITPRLALTAAEFLAYQ 268
            ||...|...........:..|:.  |:|:    |.|.....|:|...|.......||.||:....
  Fly   276 VFVGAGERTREGNDLYHEMIESKVISLEDDSSKVVLVFGQMNEPPGARSRVVLTGLTIAEYFRDV 340

  Fly   269 CEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPI 333
            ..:.||:.:.::..:.:|..||||....:|...|:...:.||:.|:.||.  ...||||||.:..
  Fly   341 DGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTRNGSITSVQA 403

  Fly   334 LTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLM-KSAIGEGMTRKDHSD 397
            :.:|.||::.|.|..|....:....:.|.:....|||.|:.|.|.||:: ...:||     :|.:
  Fly   404 VYVPADDLSDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSSSRILDPDVVGE-----EHYN 463

  Fly   398 VSNQLYACYAIGKDVQAMKAVVGEEALTPDDLLYLEFLTKFEKNFISQGNYENRTVFESLDIGWQ 462
            |:..:.......|.:|.:.|::|.:.|:.:|.|.:....|.:: |:||              .:|
  Fly   464 VARAVQKTLQAYKSLQDIIAILGMDELSEEDKLTVARARKMQR-FLSQ--------------PFQ 513

  Fly   463 LLRIFPKEMLKRIPASILAEFYPR 486
            :..||.....|.:|.....|.:.|
  Fly   514 VAEIFTGHPGKLVPVEKCVEGFKR 537

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha55	NP_001163597.1	V-ATPase_V1_B	25..488	CDD:273410	121/479 (25%)
ATPsynbetaL	NP_648836.2	PRK09280	103..568	CDD:236447	121/479 (25%)
		ATP-synt_ab_N	106..173	CDD:280947	16/70 (23%)
		F1-ATPase_beta	175..454	CDD:238553	81/301 (27%)
		ATP-synt_ab_C	462..571	CDD:278722	19/91 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45454779
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840