DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha55 and atp6v1ba

DIOPT Version :9

Sequence 1:NP_001163597.1 Gene:Vha55 / 41550 FlyBaseID:FBgn0005671 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_878298.1 Gene:atp6v1ba / 359839 ZFINID:ZDB-GENE-030711-3 Length:506 Species:Danio rerio


Alignment Length:489 Identity:431/489 - (88%)
Similarity:452/489 - (92%) Gaps:3/489 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QQAQREHVLAVSRDFISQPRLTYKTVSGVNGPLVILDEVKFPKFAEIVQLRLADGTVRSGQVLEV 68
            :.|.|:|..||.|::||||||||.|||||||||||||.||||::||||.|.|.|||.||||||||
Zfish    16 EAAARQHAQAVVRNYISQPRLTYTTVSGVNGPLVILDNVKFPRYAEIVHLTLPDGTKRSGQVLEV 80

  Fly    69 SGSKAVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDFLDIQ 133
            .|:||||||||||||||||.|.|||||||||||||||||||||||||||||:||..||||:|||.
Zfish    81 IGTKAVVQVFEGTSGIDAKKTACEFTGDILRTPVSEDMLGRVFNGSGKPIDRGPTGLAEDYLDIM 145

  Fly   134 GQPINPWSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKLPGKS 198
            ||||||..||||||||||||||||.||||||||||||||||||||||||||||||||||: ..|.
Zfish   146 GQPINPQCRIYPEEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVQ-KSKD 209

  Fly   199 VLDDHTDNFAIVFAAMGVNMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRLALTAAE 263
            |.|..::||||||||||||||||||||.||||||||:|||||||||||||||||||||||||.||
Zfish   210 VTDYSSENFAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAE 274

  Fly   264 FLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSI 328
            :||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish   275 YLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSI 339

  Fly   329 TQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPVNVLPSLSRLMKSAIGEGMTRK 393
            ||||||||||||||||||||||||||||:||||||||||||||:|||||||||||||||||||||
Zfish   340 TQIPILTMPNDDITHPIPDLTGYITEGQVYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRK 404

  Fly   394 DHSDVSNQLYACYAIGKDVQAMKAVVGEEALTPDDLLYLEFLTKFEKNFISQGNYENRTVFESLD 458
            ||:|||||||||||||||||||||||||||||.|||||||||.|||||||:||.|:|||.||:||
Zfish   405 DHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLLYLEFLQKFEKNFIAQGAYDNRTAFETLD 469

  Fly   459 IGWQLLRIFPKEMLKRIPASILAEFYPRDS--RH 490
            ||||||||||||||||||.|.|||||||:|  ||
Zfish   470 IGWQLLRIFPKEMLKRIPQSTLAEFYPRESAARH 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha55NP_001163597.1 V-ATPase_V1_B 25..488 CDD:273410 416/462 (90%)
atp6v1baNP_878298.1 V-ATPase_V1_B 37..500 CDD:273410 416/463 (90%)
ATP-synt_ab_N 41..107 CDD:280947 54/65 (83%)
V_A-ATPase_B 109..392 CDD:238555 259/283 (92%)
ATP-synt_ab_C 408..494 CDD:278722 76/85 (89%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581851
Domainoid 1 1.000 426 1.000 Domainoid score I591
eggNOG 1 0.900 - - E1_COG1156
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 878 1.000 Inparanoid score I385
OMA 1 1.010 - - QHG62168
OrthoDB 1 1.010 - - D276622at33208
OrthoFinder 1 1.000 - - FOG0001501
OrthoInspector 1 1.000 - - otm26300
orthoMCL 1 0.900 - - OOG6_100544
Panther 1 1.100 - - LDO PTHR43389
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1067
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.770

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